RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 PDGFRBP09619 1106 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 ADH5P11766 374 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 FERP16591 822 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 PRKCIP41743 596 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 MAPK8P45983 427 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 PPP3CCP48454 512 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 ZNF132P52740 706 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 TNNC1P63316 161 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 KDSRQ06136 332 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 KLHL30Q0D2K2 578 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 TAF10Q12962 218 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 SEMA3BQ13214 749 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 MAPRE1Q15691 268 aaKnown RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 ASTE1Q2TB18 679 aaPredicted RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 ZNF394Q53GI3 561 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 TDRD12Q587J7 1177 aaKnown RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 MDH1BQ5I0G3 518 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 EOGTQ5NDL2 527 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 LYSMD4Q5XG99 296 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 SLC23A3Q6PIS1 610 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 TMEM270Q6UE05 265 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 HMGB4Q8WW32 186 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 COL26A1Q96A83 441 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 ZFRQ96KR1 1074 aaKnown RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 SPACA7Q96KW9 195 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 MMS19Q96T76 1030 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 NUSAP1Q9BXS6 441 aaKnown RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 POLMQ9NP87 494 aaPredicted RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 ZDHHC4Q9NPG8 344 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 FSCN3Q9NQT6 498 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 ARHGEF4Q9NR80 690 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 NOCTQ9UK39 431 aaKnown RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 PILRBQ9UKJ0 227 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 CNTN6Q9UQ52 1028 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 ZKSCAN5Q9Y2L8 839 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 NEUROG3Q9Y4Z2 214 aa11.06□□□□□ -0.64
PGK1-203ENST00000476531 ASCC3Q8N3C0 2202 aaKnown RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
PGK1-203ENST00000476531 SPAARA0A1B0GVQ0 90 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 TCRBV21S2A2A0A5A6 115 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 UPK3BL1B0FP48 263 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 UPK3BL2E5RIL1 263 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 DDX3XO00571 662 aaKnown RBP eCLIP11.05□□□□□ -0.64
PGK1-203ENST00000476531 ADH1CP00326 375 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 ITPKAP23677 461 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 TBXAS1P24557 533 aaPredicted RBP11.05□□□□□ -0.64
PGK1-203ENST00000476531 GRIA2P42262 883 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 TNFRSF4P43489 277 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 CDK17Q00537 523 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 GFPT1Q06210 699 aaPredicted RBP11.05□□□□□ -0.64
PGK1-203ENST00000476531 HS1BP3Q53T59 392 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 SPDYCQ5MJ68 293 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 ENOSF1Q7L5Y1 443 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
PGK1-203ENST00000476531 TMTC1Q8IUR5 882 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 ETFBKMTQ8IXQ9 262 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 CCDC112Q8NEF3 446 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 ZCCHC14Q8WYQ9 949 aaKnown RBP11.05□□□□□ -0.64
PGK1-203ENST00000476531 TFAP2BQ92481 460 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 PCDHB18PQ96TA0 734 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 NUCKS1Q9H1E3 243 aaKnown RBP11.05□□□□□ -0.64
PGK1-203ENST00000476531 DPEP3Q9H4B8 488 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 SLC32A1Q9H598 525 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 ZNHIT6Q9NWK9 470 aaKnown RBP11.05□□□□□ -0.64
PGK1-203ENST00000476531 EHD2Q9NZN4 543 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 BCCIPQ9P287 314 aaKnown RBP eCLIP11.05□□□□□ -0.64
PGK1-203ENST00000476531 KLK13Q9UKR3 277 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 HCN2Q9UL51 889 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 NENFQ9UMX5 172 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 MSRB2Q9Y3D2 182 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 DAAM1Q9Y4D1 1078 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 LAMA5O15230 3695 aa11.05□□□□□ -0.64
PGK1-203ENST00000476531 CACNA1EQ15878 2313 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 PLXND1Q9Y4D7 1925 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 A0A087X0T9 212 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 E2F8A0AVK6 867 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.04□□□□□ -0.64
PGK1-203ENST00000476531 ARHGAP6O43182 974 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 CILPO75339 1184 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 TACC1O75410 805 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 ABL1P00519 1130 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 MMEP08473 750 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 FAM163BP0C2L3 166 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 FAM228BP0C875 321 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 MBL2P11226 248 aaPredicted RBP11.04□□□□□ -0.64
PGK1-203ENST00000476531 CYP11B1P15538 503 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 PTPN1P18031 435 aaKnown RBP11.04□□□□□ -0.64
PGK1-203ENST00000476531 GABRG2P18507 467 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 BRD2P25440 801 aaKnown RBP11.04□□□□□ -0.64
PGK1-203ENST00000476531 HOXD12P35452 270 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 GNL1P36915 607 aaPredicted RBP11.04□□□□□ -0.64
PGK1-203ENST00000476531 DPP6P42658 865 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 KIF11P52732 1056 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 NDST1P52848 882 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 RAD23BP54727 409 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 SIM1P81133 766 aaPredicted RBP11.04□□□□□ -0.64
PGK1-203ENST00000476531 FMO1Q01740 532 aa11.04□□□□□ -0.64
PGK1-203ENST00000476531 BYSLQ13895 437 aaKnown RBP11.04□□□□□ -0.64
PGK1-203ENST00000476531 TSR1Q2NL82 804 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms