RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RTN2O75298 545 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 PLA2G4AP47712 749 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 ETF1P62495 437 aaKnown RBP16.32■□□□□ 0.2
CPSF3-203ENST00000475482 GAD2Q05329 585 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 SRSF5Q13243 272 aaKnown RBP16.32■□□□□ 0.2
CPSF3-203ENST00000475482 SGO2Q562F6 1265 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 HEATR6Q6AI08 1181 aaKnown RBP16.32■□□□□ 0.2
CPSF3-203ENST00000475482 LAIR1Q6GTX8 287 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 Q6ZNB5 142 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 BHLHA9Q7RTU4 235 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 RNF10Q8N5U6 811 aaKnown RBP16.32■□□□□ 0.2
CPSF3-203ENST00000475482 GPR161Q8N6U8 529 aaKnown RBP16.32■□□□□ 0.2
CPSF3-203ENST00000475482 ACDQ96AP0 544 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 PNKPQ96T60 521 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 NACA2Q9H009 215 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 SPHK2Q9NRA0 654 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 EBF1Q9UH73 591 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 DNMT3LQ9UJW3 386 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 TSPAN16Q9UKR8 245 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 GUCA1BQ9UMX6 200 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 SLC8A2Q9UPR5 921 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 CEP83Q9Y592 693 aa16.32■□□□□ 0.2
CPSF3-203ENST00000475482 BTNL10A8MVZ5 291 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 TULP2O00295 520 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 XPO1O14980 1071 aaKnown RBP16.31■□□□□ 0.2
CPSF3-203ENST00000475482 THAP12O43422 761 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 VDRP11473 427 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 KIR2DL1P43626 348 aaPredicted RBP16.31■□□□□ 0.2
CPSF3-203ENST00000475482 BCAT1P54687 386 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 MRPS21P82921 87 aaKnown RBP16.31■□□□□ 0.2
CPSF3-203ENST00000475482 PDE4CQ08493 712 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 SIM2Q14190 667 aaPredicted RBP16.31■□□□□ 0.2
CPSF3-203ENST00000475482 DMC1Q14565 340 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 STILQ15468 1287 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 TAF3Q5VWG9 929 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 TMEM25Q86YD3 366 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 SFTPA1Q8IWL2 248 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 KIAA2013Q8IYS2 634 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 KIF18AQ8NI77 898 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 SLC20A1Q8WUM9 679 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 CTNNBL1Q8WYA6 563 aaPredicted RBP16.31■□□□□ 0.2
CPSF3-203ENST00000475482 TRIM11Q96F44 468 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 CDK5RAP1Q96SZ6 601 aaKnown RBP16.31■□□□□ 0.2
CPSF3-203ENST00000475482 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
CPSF3-203ENST00000475482 MARK1Q9P0L2 795 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 NCDNQ9UBB6 729 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 NENFQ9UMX5 172 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 DNAH14Q0VDD8 3507 aa16.31■□□□□ 0.2
CPSF3-203ENST00000475482 ANKRD62A6NC57 917 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.3■□□□□ 0.2
CPSF3-203ENST00000475482 MDM4O15151 490 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 STC2O76061 302 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 KAT7O95251 611 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
CPSF3-203ENST00000475482 RETP07949 1114 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 MMEP08473 750 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 TMEM253P0C7T8 217 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 RALAP11233 206 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 GRIA2P42262 883 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 TNFRSF4P43489 277 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 SLC8A3P57103 927 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 GNG11P61952 73 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 FMO1Q01740 532 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 BST2Q10589 180 aaKnown RBP16.3■□□□□ 0.2
CPSF3-203ENST00000475482 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 HSF5Q4G112 596 aaPredicted RBP16.3■□□□□ 0.2
CPSF3-203ENST00000475482 LCLAT1Q6UWP7 414 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 TADA2BQ86TJ2 420 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 SCML4Q8N228 414 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 GAB3Q8WWW8 586 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 ZNF606Q8WXB4 792 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 KCTD13Q8WZ19 329 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 DDX1Q92499 740 aaKnown RBP16.3■□□□□ 0.2
CPSF3-203ENST00000475482 SECISBP2LQ93073 1101 aaKnown RBP16.3■□□□□ 0.2
CPSF3-203ENST00000475482 ALS2CR12Q96Q35 445 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 HINFPQ9BQA5 517 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 ISCUQ9H1K1 167 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 NUDT5Q9UKK9 219 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 MMP17Q9ULZ9 603 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 ABCA7Q8IZY2 2146 aa16.3■□□□□ 0.2
CPSF3-203ENST00000475482 A0A0A6YYK5 440 aaPredicted RBP16.29■□□□□ 0.2
CPSF3-203ENST00000475482 LRP3O75074 770 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 TULP3O75386 442 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 ZBED1O96006 694 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 KLKB1P03952 638 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 APODP05090 189 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 IRF1P10914 325 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 CD19P15391 556 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 CHRNB2P17787 502 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 ARHGAP25P42331 645 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 PXNP49023 591 aaPredicted RBP16.29■□□□□ 0.2
CPSF3-203ENST00000475482 TKTL1P51854 596 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 CNGA2Q16280 664 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 C10orf120Q5SQS8 335 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 RASSF3Q86WH2 238 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 ARHGAP18Q8N392 663 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 TRIM58Q8NG06 486 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 SLC35F5Q8WV83 523 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms