RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 DHTKD1Q96HY7 919 aaPredicted RBP4.73□□□□□ -1.65
LMNB1-205ENST00000472034 TM9SF2Q99805 663 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 ASPNQ9BXN1 380 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 SRRTQ9BXP5 876 aaKnown RBP4.73□□□□□ -1.65
LMNB1-205ENST00000472034 EIF2AQ9BY44 585 aaKnown RBP4.73□□□□□ -1.65
LMNB1-205ENST00000472034 EPN3Q9H201 632 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 EBF3Q9H4W6 596 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 GKN1Q9NS71 199 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 IL20Q9NYY1 176 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 GABBR1Q9UBS5 961 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 CCDC39Q9UFE4 941 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 SLC12A7Q9Y666 1083 aa4.73□□□□□ -1.65
LMNB1-205ENST00000472034 NIPBLQ6KC79 2804 aaeCLIP4.73□□□□□ -1.65
LMNB1-205ENST00000472034 SF3B1O75533 1304 aaKnown RBP eCLIP4.72□□□□□ -1.654e-6■■■■■ 84.1
LMNB1-205ENST00000472034 PLXND1Q9Y4D7 1925 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ANKHD1Q8IWZ3 2542 aaKnown RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CASTOR2A6NHX0 329 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 KLRF2D3W0D1 207 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 I3L4J1 428 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 IFRD1O00458 451 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 PRRG1O14668 218 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ZNF197O14709 1029 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 MEIS2O14770 477 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 KLK10O43240 276 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CYTH3O43739 400 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CLEC3AO75596 197 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 RPN1P04843 607 aaKnown RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 PRKCBP05771 671 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 PARP1P09874 1014 aaKnown RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 NME1P15531 152 aaKnown RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CCNCP24863 283 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 HOXA11P31270 313 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 HOXD12P35452 270 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 DCTP40126 519 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 PRPHP41219 470 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 NASPP49321 788 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 RAB27AP51159 221 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ZNF131P52739 623 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ZNF33AQ06730 810 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 POSTNQ15063 836 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 E2F5Q15329 346 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 SKIDA1Q1XH10 827 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ARHGAP29Q52LW3 1261 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CCDC178Q5BJE1 867 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CCDC122Q5T0U0 273 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CYP4A22Q5TCH4 519 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 HES3Q5TGS1 186 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CDKAL1Q5VV42 579 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 AP1ARQ63HQ0 302 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CC2D1AQ6P1N0 951 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CCDC80Q76M96 950 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CATSPER4Q7RTX7 472 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 SDCCAG8Q86SQ7 713 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 TMPRSS12Q86WS5 348 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 PTRH1Q86Y79 214 aaKnown RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ERC1Q8IUD2 1116 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 KIAA1958Q8N8K9 716 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 RBBP8NLQ8NC74 664 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 DNAJB8Q8NHS0 232 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CCDC26Q8TAB7 109 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 FAM76AQ8TAV0 307 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 USP33Q8TEY7 942 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 HMGB4Q8WW32 186 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ERLEC1Q96DZ1 483 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 HIC2Q96JB3 615 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 C8orf48Q96LL4 319 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 HSPA12BQ96MM6 686 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 KREMEN1Q96MU8 473 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 GSDMAQ96QA5 445 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 GCOM2Q9BZD3 368 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CXCL16Q9H2A7 254 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 TNKS2Q9H2K2 1166 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 UNC45AQ9H3U1 944 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ZHX3Q9H4I2 956 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 GAREM1Q9H706 876 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CD93Q9NPY3 652 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 ZNF302Q9NR11 478 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 KCNH7Q9NS40 1196 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 TM7SF3Q9NS93 570 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 EXOC1Q9NV70 894 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 GPATCH2Q9NW75 528 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 DCAF16Q9NXF7 216 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 PPT2Q9UMR5 302 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.72□□□□□ -1.65
LMNB1-205ENST00000472034 INSL5Q9Y5Q6 135 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 SDK2Q58EX2 2172 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 NEDD4P46934 1319 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 CNTNAP2Q9UHC6 1331 aa4.72□□□□□ -1.65
LMNB1-205ENST00000472034 HIVEP3Q5T1R4 2406 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 TMEM150BA6NC51 233 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 ZNF213O14771 459 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 TNFRSF10CO14798 259 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 SLC27A2O14975 620 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 KIAA0754O94854 1291 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 NAT2P11245 290 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 ITGA4P13612 1032 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 ATP2B1P20020 1258 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 DRD1P21728 446 aa4.71□□□□□ -1.66
LMNB1-205ENST00000472034 SFPQP23246 707 aaKnown RBP eCLIP4.71□□□□□ -1.661e-7■■■■■ 32.9
LMNB1-205ENST00000472034 AKAP5P24588 427 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms