RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PCDHA12Q9UN75 941 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 COG5Q9UP83 839 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 SPATA31A5Q5VU36 1347 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 SPATA31A7Q8IWB4 1347 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 ZNF335Q9H4Z2 1342 aaPredicted RBP5.45□□□□□ -1.54
CD46-213ENST00000471987 PRR23D1E9PI22 279 aaPredicted RBP5.44□□□□□ -1.54
CD46-213ENST00000471987 UGDHO60701 494 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 EPN2O95208 641 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 PRR23D2P0DMB1 279 aaPredicted RBP5.44□□□□□ -1.54
CD46-213ENST00000471987 SLC5A2P31639 672 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 GAB1Q13480 694 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 GLE1Q53GS7 698 aaKnown RBP5.44□□□□□ -1.54
CD46-213ENST00000471987 TMEM196Q5HYL7 178 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 RFX6Q8HWS3 928 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 CLASRPQ8N2M8 674 aaKnown RBP5.44□□□□□ -1.54
CD46-213ENST00000471987 OR52L2PQ8NGH6 319 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 TTC8Q8TAM2 541 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 GJA10Q969M2 543 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 LRRC46Q96FV0 321 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 ZNF845Q96IR2 970 aaPredicted RBP5.44□□□□□ -1.54
CD46-213ENST00000471987 MAGEB5Q9BZ81 275 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 IPO11Q9UI26 975 aaKnown RBP5.44□□□□□ -1.54
CD46-213ENST00000471987 G3BP2Q9UN86 482 aaKnown RBP5.44□□□□□ -1.54
CD46-213ENST00000471987 CORO2BQ9UQ03 480 aa5.44□□□□□ -1.54
CD46-213ENST00000471987 KCNQ3O43525 872 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 ENO1P06733 434 aaKnown RBP5.43□□□□□ -1.54
CD46-213ENST00000471987 TBXAS1P24557 533 aaPredicted RBP5.43□□□□□ -1.54
CD46-213ENST00000471987 MST1P26927 711 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 CDC25AP30304 524 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 SOX2P48431 317 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 ZNF84P51523 738 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 SEMA3BQ13214 749 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 CCDC150Q8NCX0 1101 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 PMM1Q92871 262 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 TRIM2Q9C040 744 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 MRPL44Q9H9J2 332 aaKnown RBP5.43□□□□□ -1.54
CD46-213ENST00000471987 ERVK-5Q9HDB9 667 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 EMSYQ7Z589 1322 aa5.43□□□□□ -1.54
CD46-213ENST00000471987 TMEM272A0A1B0GTI8 110 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 ZSCAN9O15535 394 aaPredicted RBP5.42□□□□□ -1.54
CD46-213ENST00000471987 MYL4P12829 197 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
CD46-213ENST00000471987 DLGAP5Q15398 846 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 ELF2Q15723 593 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 INPP5JQ15735 1006 aaPredicted RBP5.42□□□□□ -1.54
CD46-213ENST00000471987 UBAP2Q5T6F2 1119 aaKnown RBP5.42□□□□□ -1.54
CD46-213ENST00000471987 KYAT3Q6YP21 454 aaKnown RBP5.42□□□□□ -1.54
CD46-213ENST00000471987 BEND5Q7L4P6 421 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 TRAPPC11Q7Z392 1133 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 C14orf80Q86SX3 495 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 SMRP1Q8NCR6 262 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 TSR2Q969E8 191 aaKnown RBP5.42□□□□□ -1.54
CD46-213ENST00000471987 TTC17Q96AE7 1141 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 THSD1Q9NS62 852 aa5.42□□□□□ -1.54
CD46-213ENST00000471987 LACTBL1A8MY62 500 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 SGPL1O95470 568 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 AKR1A1P14550 325 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 IDEP14735 1019 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 ATF3P18847 181 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 FGFR2P21802 821 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 SLC8A1P32418 973 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 GSTM5P46439 218 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 PGGT1BP53609 377 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 ACSM6Q6P461 480 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 CCDC28AQ8IWP9 274 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 ADHFE1Q8IWW8 467 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 TMEM199Q8N511 208 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 GLMPQ8WWB7 406 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 ASB12Q8WXK4 309 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 EIF3CQ99613 913 aaKnown RBP5.41□□□□□ -1.54
CD46-213ENST00000471987 ZPBPQ9BS86 351 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 CDCP1Q9H5V8 836 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 FZD3Q9NPG1 666 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 ANAPC4Q9UJX5 808 aa5.41□□□□□ -1.54
CD46-213ENST00000471987 A0A0G2JK05 382 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 KIR2DS5A0A0G2JLQ3 304 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 POM121BA6NF01 834 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 KIR2DS3K7RE56 304 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 PQBP1O60828 265 aaKnown RBP5.4□□□□□ -1.54
CD46-213ENST00000471987 POLD2P49005 469 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 AGTR2P50052 363 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 PPATQ06203 517 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 ZNF543Q08ER8 600 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 DMWDQ09019 674 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 ATP1A4Q13733 1029 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 PTGR1Q14914 329 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.4□□□□□ -1.54
CD46-213ENST00000471987 KLHDC7AQ5VTJ3 777 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 LIPMQ5VYY2 423 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 CCDC144NLQ6NUI1 221 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 DHRS13Q6UX07 377 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 KIAA0408Q6ZU52 694 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 SPATA3Q8NHX4 192 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 B4GALNT2Q8NHY0 566 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 GRAMD1AQ96CP6 724 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 MSI2Q96DH6 328 aaKnown RBP5.4□□□□□ -1.54
CD46-213ENST00000471987 NUDT22Q9BRQ3 303 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 PIMREGQ9BSJ6 248 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 TMEM204Q9BSN7 226 aa5.4□□□□□ -1.54
CD46-213ENST00000471987 HTATIP2Q9BUP3 242 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms