RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SPDYCQ5MJ68 293 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 TMCO3Q6UWJ1 677 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 CEP128Q6ZU80 1094 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 MTSS1LQ765P7 747 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 BZW1Q7L1Q6 419 aaKnown RBP9.51□□□□□ -0.89
PTPRE-207ENST00000471218 DGLUCYQ7Z3D6 616 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 MON1AQ86VX9 555 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 TMEM173Q86WV6 379 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-207ENST00000471218 C1orf210Q8IVY1 113 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 ARFGAP1Q8N6T3 406 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 ATL2Q8NHH9 583 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 FAM172AQ8WUF8 416 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 FAM149B1Q96BN6 582 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 NELL2Q99435 816 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 KRT12Q99456 494 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 HINFPQ9BQA5 517 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 OSBPL6Q9BZF3 934 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 GPR62Q9BZJ7 368 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 ULBP1Q9BZM6 244 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 SLC2A4RGQ9NR83 387 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 ABCC13Q9NSE7 274 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 CLIC5Q9NZA1 410 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 TJP2Q9UDY2 1190 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 DRG1Q9Y295 367 aaKnown RBP9.51□□□□□ -0.89
PTPRE-207ENST00000471218 TIMM13Q9Y5L4 95 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-207ENST00000471218 RAD54BQ9Y620 910 aa9.51□□□□□ -0.89
PTPRE-207ENST00000471218 CFAP69A5D8W1 941 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 I3L4J1 428 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 APOC4-APOC2K7ER74 178 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 CLDN5O00501 218 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 C2CD2LO14523 706 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 TEX28O15482 410 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 HCRTO43612 131 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 PI15O43692 258 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 XYLBO75191 536 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 HEXIM1O94992 359 aaKnown RBP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 ECEL1O95672 775 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 APOC2P02655 101 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 HNRNPA1P09651 372 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 SLC2A3P11169 496 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 RALAP11233 206 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 LAMP2P13473 410 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 LCP1P13796 627 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 TGM2P21980 687 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 BDNFP23560 247 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 KDELR1P24390 212 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 COILP38432 576 aaPredicted RBP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 SSR1P43307 286 aaKnown RBP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 PPP3CCP48454 512 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 HCAR3P49019 387 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 NR2C2P49116 596 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 HDAC4P56524 1084 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 CAV1Q03135 178 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 PRKCQQ04759 706 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 ZNF211Q13398 564 aaPredicted RBP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 ARL13BQ3SXY8 428 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 SLC39A12Q504Y0 691 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 BRMS1LQ5PSV4 323 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 ERMARDQ5T6L9 678 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 MSANTD2Q6P1R3 559 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 FBXO38Q6PIJ6 1188 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 C4orf22Q6V702 233 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 CCNI2Q6ZMN8 369 aaPredicted RBP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 SND1Q7KZF4 910 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 TADA2BQ86TJ2 420 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 LRRTM3Q86VH5 581 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 CCDC50Q8IVM0 306 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 NUP93Q8N1F7 819 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 EMC1Q8N766 993 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 CCDC89Q8N998 374 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 BBOF1Q8ND07 529 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 PDZD8Q8NEN9 1154 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 HASPINQ8TF76 798 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 CAVIN3Q969G5 261 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 MAGOHBQ96A72 148 aaKnown RBP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 ERP44Q9BS26 406 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 LRRC1Q9BTT6 524 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 TTLL2Q9BWV7 592 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 PRKD2Q9BZL6 878 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 FOXP3Q9BZS1 431 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 DCLK3Q9C098 648 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 RETREG1Q9H6L5 497 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 VIPAS39Q9H9C1 493 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 TBC1D17Q9HA65 648 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 ARHGEF3Q9NR81 526 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 OLA1Q9NTK5 396 aaKnown RBP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 DONSONQ9NYP3 566 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 CACNG4Q9UBN1 327 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 AFF4Q9UHB7 1163 aaKnown RBP9.5□□□□□ -0.89
PTPRE-207ENST00000471218 CDH22Q9UJ99 828 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 FBXO4Q9UKT5 387 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 PLXNA3P51805 1871 aa9.5□□□□□ -0.89
PTPRE-207ENST00000471218 ZNF292O60281 2723 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 CACNA1AO00555 2505 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 DCHS1Q96JQ0 3298 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 ANHXE9PGG2 379 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 CAPN9O14815 690 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 RAD51CO43502 376 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 BEST1O76090 585 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 IGLV3-25P01717 112 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms