RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 ATP6V1B2P21281 511 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 NTSP30990 170 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 HALP42357 657 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 POLR2LP62875 67 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 MAPK7Q13164 816 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 NFYCQ13952 458 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 CYP20A1Q6UW02 462 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 SH3BP5LQ7L8J4 393 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ZNF248Q8NDW4 579 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 PROX1Q92786 737 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 YME1L1Q96TA2 773 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 SPON1Q9HCB6 807 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 DUSP12Q9UNI6 340 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 EPHB2P29323 1055 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 RPL3P39023 403 aaKnown RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 NFE2Q16621 373 aaPredicted RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 PRR5LQ6MZQ0 368 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 BHLHB9Q6PI77 547 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 OR52L1Q8NGH7 329 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 ZSCAN18Q8TBC5 510 aaPredicted RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 RPS6KL1Q9Y6S9 549 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 RTN3O95197 1032 aaPredicted RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CSNK2BP67870 215 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 ZNF543Q08ER8 600 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 ADGRF2Q8IZF7 708 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 USP38Q8NB14 1042 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 MDM1Q8TC05 714 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 NRDE2Q9H7Z3 1164 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 TAGLN3Q9UI15 199 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 TPRKBQ9Y3C4 175 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 POLRMTO00411 1230 aaKnown RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 GALCP54803 685 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 RPS6P62753 249 aaKnown RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 PACS1Q6VY07 963 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 C4orf33Q8N1A6 199 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 LRRC71Q8N4P6 559 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 REXO4Q9GZR2 422 aaKnown RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 EPB41L4BQ9H329 900 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CCDC177Q9NQR7 707 aaPredicted RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 SNX8Q9Y5X2 465 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 AP1G2O75843 785 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 KLHL18O94889 574 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 TDP2O95551 362 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CKMP06732 381 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 RHOCP08134 193 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 ACOT2P49753 483 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 BCAP31P51572 246 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 DGKKQ5KSL6 1271 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 C11orf63Q6NUN7 778 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 ERO1BQ86YB8 467 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 STK40Q8N2I9 435 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CRELD1Q96HD1 420 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 PHF20L1A8MW92 1017 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CXCR2P25025 360 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 GCLCP48506 637 aaPredicted RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 SARSP49591 514 aaKnown RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 TUBA4AP68366 448 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 BNC1Q01954 994 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 TRAF2Q12933 501 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CYP2A13Q16696 494 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 FAM120BQ96EK7 910 aaKnown RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 SPATA5L1Q9BVQ7 753 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 DDIT4Q9NX09 232 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 RABGEF1Q9UJ41 708 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 TBX20Q9UMR3 447 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 RGS20O76081 388 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 OR56A5P0C7T3 313 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 RASA1P20936 1047 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 THPOP40225 353 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 IL12RB1P42701 662 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 XIAPP98170 497 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 SPANXN2Q5MJ10 180 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CYB5R4Q7L1T6 521 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 PANX3Q96QZ0 392 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 KCTD10Q9H3F6 313 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 NOD2Q9HC29 1040 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 TRIM39Q9HCM9 518 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 MCM8Q9UJA3 840 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 GTF3C4Q9UKN8 822 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 ITGA11Q9UKX5 1188 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 SHOC2Q9UQ13 582 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CCL15-CCL14A0A0B4J2E2 113 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 SNAPC5O75971 98 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CRABP2P29373 138 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 NR2C2P49116 596 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CDK7P50613 346 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CDK16Q00536 496 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 CCL15Q16663 113 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 ATG16L2Q8NAA4 619 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 ATXN2LQ8WWM7 1075 aaKnown RBP9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 TRAPPC9Q96Q05 1148 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 SPATA2Q9UM82 520 aa9.1□□□□□ -0.95
SHROOM4-203ENST00000460112 KPNA4O00629 521 aaPredicted RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 LSM1O15116 133 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 RGL2O15211 777 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 CST8O60676 142 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 TLX1P31314 330 aaPredicted RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 LRRC36Q1X8D7 754 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 STYK1Q6J9G0 422 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms