RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CLPTM1O96005 669 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 PDK2Q15119 407 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 TOMM20Q15388 145 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 KLHL17Q6TDP4 642 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 ILDR2Q71H61 639 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 HDAC7Q8WUI4 952 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 OLFM1Q99784 485 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 LACRTQ9GZZ8 138 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 MYLK2Q9H1R3 596 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 SERHL2Q9H4I8 314 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 SERHLQ9NQF3 203 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 RBM22Q9NW64 420 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNX27-204ENST00000458013 SAE1Q9UBE0 346 aaPredicted RBP20.13■□□□□ 0.81
SNX27-204ENST00000458013 MTSS1O43312 755 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 CSF1RP07333 972 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 RPL21P46778 160 aaKnown RBP20.13■□□□□ 0.81
SNX27-204ENST00000458013 IFI35P80217 286 aaPredicted RBP20.13■□□□□ 0.81
SNX27-204ENST00000458013 CLEC17AQ6ZS10 378 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 SIKE1Q9BRV8 207 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 AVENQ9NQS1 362 aaPredicted RBP20.13■□□□□ 0.81
SNX27-204ENST00000458013 PDP2Q9P2J9 529 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 TRIM24O15164 1050 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 MAP3K13O43283 966 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 RIPK2O43353 540 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 SEC22BO75396 215 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 CRTAMO95727 393 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 NUP62P37198 522 aaPredicted RBP20.13■□□□□ 0.81
SNX27-204ENST00000458013 NAIF1Q69YI7 327 aaPredicted RBP20.13■□□□□ 0.81
SNX27-204ENST00000458013 FOXR1Q6PIV2 292 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 DPP10Q8N608 796 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 ANKZF1Q9H8Y5 726 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 SPACA6W5XKT8 324 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 NAMPTP43490 491 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 PEX5P50542 639 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 BCAT1P54687 386 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 TCP10LQ8TDR4 215 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 MRPS26Q9BYN8 205 aaKnown RBP20.13■□□□□ 0.81
SNX27-204ENST00000458013 TET3O43151 1660 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 DNALI1O14645 258 aaPredicted RBP20.13■□□□□ 0.81
SNX27-204ENST00000458013 TIMM44O43615 452 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 ALOX12P18054 663 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 NDST1P52848 882 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 PKNOX1P55347 436 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 KCNMB4Q86W47 210 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 LIMD1Q9UGP4 676 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 MYO3AQ8NEV4 1616 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 SPHKAPQ2M3C7 1700 aa20.13■□□□□ 0.81
SNX27-204ENST00000458013 RGL2O15211 777 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 ITGALP20701 1170 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 MAPK1P28482 360 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 PTPAQ15257 358 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 COMMD8Q9NX08 183 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 CCDC167Q9P0B6 97 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 PSMD11O00231 422 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 ZMPSTE24O75844 475 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 THP07101 528 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 ZSCAN5DPP0CG00 497 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 DDR2Q16832 855 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 TMC5Q6UXY8 1006 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 MACC1Q6ZN28 852 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 ZNF438Q7Z4V0 828 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 ENGASEQ8NFI3 743 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 AKT1S1Q96B36 256 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 ARHGAP20Q9P2F6 1191 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 ZNF112Q9UJU3 913 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 GUCA1AP43080 201 aaPredicted RBP20.12■□□□□ 0.81
SNX27-204ENST00000458013 INAQ16352 499 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 C4orf22Q6V702 233 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 FAR2Q96K12 515 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 RNF145Q96MT1 663 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 DPY30Q9C005 99 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 CBX6O95503 412 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 FASTKQ14296 549 aaKnown RBP20.12■□□□□ 0.81
SNX27-204ENST00000458013 NRF1Q16656 503 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 CYP2W1Q8TAV3 490 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 MRPS31Q92665 395 aaKnown RBP20.12■□□□□ 0.81
SNX27-204ENST00000458013 PDGFDQ9GZP0 370 aaPredicted RBP20.12■□□□□ 0.81
SNX27-204ENST00000458013 AP4S1Q9Y587 144 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 SYNCRIPO60506 623 aaKnown RBP20.12■□□□□ 0.81
SNX27-204ENST00000458013 CACNA2D1P54289 1103 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 TSPAN16Q9UKR8 245 aa20.12■□□□□ 0.81
SNX27-204ENST00000458013 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
SNX27-204ENST00000458013 H3BN98 237 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 PKN2Q16513 984 aaKnown RBP20.11■□□□□ 0.81
SNX27-204ENST00000458013 COQ7Q99807 217 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 DGCR6LQ9BY27 220 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 FOXP3Q9BZS1 431 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.11■□□□□ 0.81
SNX27-204ENST00000458013 GAKO14976 1311 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 ENO2P09104 434 aaPredicted RBP20.11■□□□□ 0.81
SNX27-204ENST00000458013 UMPSP11172 480 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 HERC6Q8IVU3 1022 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 CAMKK2Q96RR4 588 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 DCLK3Q9C098 648 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 FHDC1Q9C0D6 1143 aaPredicted RBP20.11■□□□□ 0.81
SNX27-204ENST00000458013 TISP43B9A030 160 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 GRK3P35626 688 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 EIF2B2P49770 351 aaKnown RBP20.11■□□□□ 0.81
SNX27-204ENST00000458013 PRR23CQ6ZRP0 262 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 TMA7Q9Y2S6 64 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms