RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 USP25Q9UHP3 1055 aa8.41□□□□□ -1.06
SMARCE1-206ENST00000447024 TMEFF2Q9UIK5 374 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-206ENST00000447024 RCOR1Q9UKL0 485 aa8.41□□□□□ -1.06
SMARCE1-206ENST00000447024 GDAQ9Y2T3 454 aa8.41□□□□□ -1.06
SMARCE1-206ENST00000447024 STYXL1Q9Y6J8 313 aa8.41□□□□□ -1.06
SMARCE1-206ENST00000447024 A0A0B4J269 797 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 TTC26A0AVF1 554 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 ARHGEF37A1IGU5 675 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 FRMD3A2A2Y4 597 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 K7ENM7 598 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 PER2O15055 1255 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 KIAA0391O15091 583 aaKnown RBP8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 LINC01565O15544 149 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 RECKO95980 971 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 EDN1P05305 212 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 MYL1P05976 194 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 ALADP13716 330 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 CYP3A5P20815 502 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 KLRC2P26717 231 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 GTF2F1P35269 517 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 CLCN4P51793 760 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 KRT85P78386 507 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 DHX8Q14562 1220 aaKnown RBP8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 SPECC1Q5M775 1068 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 C15orf39Q6ZRI6 1047 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 NT5DC4Q86YG4 428 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 LRRC15Q8TF66 581 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 ZCCHC14Q8WYQ9 949 aaKnown RBP8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 DIO2Q92813 273 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 DNAJC19Q96DA6 116 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 TOE1Q96GM8 510 aaKnown RBP8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 KLHL5Q96PQ7 755 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 TTPALQ9BTX7 342 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 STRA6Q9BX79 667 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 VN1R3Q9BXE9 311 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 ASB7Q9H672 318 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 SFXN1Q9H9B4 322 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 POLD4Q9HCU8 107 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 FBXL7Q9UJT9 491 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 PRG3Q9Y2Y8 225 aaPredicted RBP8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 DERAQ9Y315 318 aa8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 USP15Q9Y4E8 981 aaPredicted RBP8.4□□□□□ -1.06
SMARCE1-206ENST00000447024 MTCL1Q9Y4B5 1905 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 MYMKA6NI61 221 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ARNTLO00327 626 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 SYN3O14994 580 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 FZD7O75084 574 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 B3GAT3O94766 335 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 LDHAP00338 332 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 GLUD1P00367 558 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 CNPP09543 421 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 IL9P15248 144 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 LRPAP1P30533 357 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ME1P48163 572 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 SNRPFP62306 86 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 PPP2CBP62714 309 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 PPP2CAP67775 309 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 UPP1Q16831 310 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 SLC10A6Q3KNW5 377 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ATAT1Q5SQI0 421 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 RESP18Q5W5W9 173 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 SYCE2Q6PIF2 218 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ARHGEF18Q6ZSZ5 1173 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ANKS3Q6ZW76 656 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 KBTBD2Q8IY47 623 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 VN1R2Q8NFZ6 395 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 BTN2A2Q8WVV5 523 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ACCSQ96QU6 501 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 MENTQ9BUN1 341 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 KRTAP9-8Q9BYQ0 159 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ZHX3Q9H4I2 956 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 TMEM206Q9H813 350 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 MRPL44Q9H9J2 332 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 RPF1Q9H9Y2 349 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ZDHHC7Q9NXF8 308 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 ANKFY1Q9P2R3 1169 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 CROTQ9UKG9 612 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 MAFFQ9ULX9 164 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 BARX2Q9UMQ3 279 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 UBQLN1Q9UMX0 589 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 COA3Q9Y2R0 106 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 NR2E1Q9Y466 385 aa8.39□□□□□ -1.07
SMARCE1-206ENST00000447024 PVALEFA0A1B0GWK0 134 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 CASTOR2A6NHX0 329 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 LOC730098B7Z3J9 87 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 PI4K2BG5E9Z4 385 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 SCAMP3O14828 347 aaKnown RBP8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 EIF3DO15371 548 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 TEX28O15482 410 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 FAM189A1O60320 539 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 CSPG5O95196 566 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 POU2F2P09086 479 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 HNRNPA1P09651 372 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 CMA1P23946 247 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 HOXA9P31269 272 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 CA8P35219 290 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 MATR3P43243 847 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 NUCB2P80303 420 aa8.38□□□□□ -1.07
SMARCE1-206ENST00000447024 ZBTB6Q15916 424 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms