RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 AEBP2Q6ZN18 517 aaPredicted RBP38.52■■■■□ 3.76
SMARCE1-206ENST00000447024 CHIC1Q5VXU3 224 aa36.56■■■■□ 3.44
SMARCE1-206ENST00000447024 SENP3Q9H4L4 574 aaPredicted RBP32.83■■■□□ 2.85
SMARCE1-206ENST00000447024 PHF23Q9BUL5 403 aaPredicted RBP32.4■■■□□ 2.78
SMARCE1-206ENST00000447024 FOXD1Q16676 465 aa30.61■■■□□ 2.49
SMARCE1-206ENST00000447024 PLPPR3Q6T4P5 718 aa29.2■■■□□ 2.26
SMARCE1-206ENST00000447024 MSH5O43196 834 aa28.63■■■□□ 2.17
SMARCE1-206ENST00000447024 PPP6R1Q9UPN7 881 aa28.62■■■□□ 2.17
SMARCE1-206ENST00000447024 PIAS4Q8N2W9 510 aaPredicted RBP28.61■■■□□ 2.17
SMARCE1-206ENST00000447024 ADRA2BP18089 450 aa28.53■■■□□ 2.16
SMARCE1-206ENST00000447024 POTEDQ86YR6 584 aa27.97■■■□□ 2.07
SMARCE1-206ENST00000447024 MAPK8IP2Q13387 824 aaPredicted RBP26.21■■□□□ 1.79
SMARCE1-206ENST00000447024 SCAF1Q9H7N4 1312 aaKnown RBP26.07■■□□□ 1.76
SMARCE1-206ENST00000447024 DMRT2Q9Y5R5 561 aa26.05■■□□□ 1.76
SMARCE1-206ENST00000447024 PPP4R3CPQ6ZMV5 832 aa25.61■■□□□ 1.69
SMARCE1-206ENST00000447024 CNKSR2Q8WXI2 1034 aa25.12■■□□□ 1.61
SMARCE1-206ENST00000447024 HOXD11P31277 338 aaPredicted RBP25.08■■□□□ 1.61
SMARCE1-206ENST00000447024 DCAF8L1A6NGE4 600 aa24.97■■□□□ 1.59
SMARCE1-206ENST00000447024 RNF216Q9NWF9 866 aaPredicted RBP24.89■■□□□ 1.58
SMARCE1-206ENST00000447024 NCBP3Q53F19 620 aaKnown RBP24.6■■□□□ 1.53
SMARCE1-206ENST00000447024 CACNB1Q02641 598 aaPredicted RBP24.57■■□□□ 1.52
SMARCE1-206ENST00000447024 RNF39Q9H2S5 420 aa24.44■■□□□ 1.5
SMARCE1-206ENST00000447024 NPM3O75607 178 aaKnown RBP24.28■■□□□ 1.48
SMARCE1-206ENST00000447024 DNAJC5BQ9UF47 199 aa24.2■■□□□ 1.46
SMARCE1-206ENST00000447024 C1QBPQ07021 282 aaKnown RBP24.06■■□□□ 1.44
SMARCE1-206ENST00000447024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.413e-7■■■□□ 15.4
SMARCE1-206ENST00000447024 KCNA4P22459 653 aa23.82■■□□□ 1.4
SMARCE1-206ENST00000447024 U3KPZ7 1027 aaPredicted RBP23.41■■□□□ 1.34
SMARCE1-206ENST00000447024 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
SMARCE1-206ENST00000447024 SPINK5Q9NQ38 1064 aaPredicted RBP23.08■■□□□ 1.29
SMARCE1-206ENST00000447024 CAPN15O75808 1086 aa23.02■■□□□ 1.28
SMARCE1-206ENST00000447024 DSG3P32926 999 aa22.9■■□□□ 1.26
SMARCE1-206ENST00000447024 APLP2Q06481 763 aa22.72■■□□□ 1.23
SMARCE1-206ENST00000447024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
SMARCE1-206ENST00000447024 HNRNPUL2Q1KMD3 747 aaKnown RBP22.71■■□□□ 1.23
SMARCE1-206ENST00000447024 TRHP20396 242 aaPredicted RBP22.66■■□□□ 1.22
SMARCE1-206ENST00000447024 ZNF219Q9P2Y4 722 aaPredicted RBP22.61■■□□□ 1.21
SMARCE1-206ENST00000447024 SAMD1Q6SPF0 538 aaPredicted RBP22.59■■□□□ 1.21
SMARCE1-206ENST00000447024 ABCB7O75027 752 aa22.51■■□□□ 1.19
SMARCE1-206ENST00000447024 SLC4A1APQ9BWU0 796 aaKnown RBP22.47■■□□□ 1.19
SMARCE1-206ENST00000447024 MYCNP04198 464 aaPredicted RBP22.46■■□□□ 1.19
SMARCE1-206ENST00000447024 FOXD4L1Q9NU39 408 aa22.22■■□□□ 1.15
SMARCE1-206ENST00000447024 POLA2Q14181 598 aa22.04■■□□□ 1.12
SMARCE1-206ENST00000447024 ATF5Q9Y2D1 282 aaPredicted RBP21.95■■□□□ 1.1
SMARCE1-206ENST00000447024 ZBTB22O15209 634 aa21.91■■□□□ 1.1
SMARCE1-206ENST00000447024 POTEHQ6S545 545 aa21.91■■□□□ 1.1
SMARCE1-206ENST00000447024 RBM42Q9BTD8 480 aaKnown RBP21.83■■□□□ 1.09
SMARCE1-206ENST00000447024 ZBTB12Q9Y330 459 aaPredicted RBP21.58■■□□□ 1.05
SMARCE1-206ENST00000447024 ATXN8OSP0DMR3 200 aa21.52■■□□□ 1.04
SMARCE1-206ENST00000447024 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
SMARCE1-206ENST00000447024 CHRDL2Q6WN34 429 aa21.36■■□□□ 1.01
SMARCE1-206ENST00000447024 AKT1S1Q96B36 256 aa21.33■■□□□ 1.01
SMARCE1-206ENST00000447024 REM2Q8IYK8 340 aaPredicted RBP21.14■□□□□ 0.97
SMARCE1-206ENST00000447024 FBLN2P98095 1184 aa21.06■□□□□ 0.96
SMARCE1-206ENST00000447024 SPDYE2BA6NHP3 402 aa20.93■□□□□ 0.94
SMARCE1-206ENST00000447024 PITPNM1O00562 1244 aa20.93■□□□□ 0.94
SMARCE1-206ENST00000447024 SPDYE6P0CI01 402 aa20.93■□□□□ 0.94
SMARCE1-206ENST00000447024 MKRN4PQ13434 485 aaPredicted RBP20.93■□□□□ 0.94
SMARCE1-206ENST00000447024 SPDYE2Q495Y8 402 aa20.93■□□□□ 0.94
SMARCE1-206ENST00000447024 CSRNP3Q8WYN3 585 aa20.88■□□□□ 0.93
SMARCE1-206ENST00000447024 PIP4P2Q8N4L2 257 aa20.86■□□□□ 0.93
SMARCE1-206ENST00000447024 FXR2P51116 673 aaKnown RBP eCLIP20.73■□□□□ 0.91
SMARCE1-206ENST00000447024 ZNF692Q9BU19 519 aaPredicted RBP20.68■□□□□ 0.9
SMARCE1-206ENST00000447024 SSUH2Q9Y2M2 353 aa20.67■□□□□ 0.9
SMARCE1-206ENST00000447024 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
SMARCE1-206ENST00000447024 SPDYE1Q8NFV5 336 aaPredicted RBP20.56■□□□□ 0.88
SMARCE1-206ENST00000447024 SP7Q8TDD2 431 aaPredicted RBP20.54■□□□□ 0.88
SMARCE1-206ENST00000447024 CLEC11AQ9Y240 323 aa20.54■□□□□ 0.88
SMARCE1-206ENST00000447024 HAX1O00165 279 aa20.46■□□□□ 0.87
SMARCE1-206ENST00000447024 PRKAR2AP13861 404 aaKnown RBP20.38■□□□□ 0.85
SMARCE1-206ENST00000447024 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
SMARCE1-206ENST00000447024 EVX2Q03828 476 aa20.23■□□□□ 0.83
SMARCE1-206ENST00000447024 PRR29P0C7W0 189 aa20.19■□□□□ 0.82
SMARCE1-206ENST00000447024 CHADLQ6NUI6 762 aa20.17■□□□□ 0.82
SMARCE1-206ENST00000447024 C19orf67A6NJJ6 358 aa20.07■□□□□ 0.8
SMARCE1-206ENST00000447024 SPDYE4A6NLX3 237 aa19.93■□□□□ 0.78
SMARCE1-206ENST00000447024 FARP1Q9Y4F1 1045 aaPredicted RBP19.84■□□□□ 0.77
SMARCE1-206ENST00000447024 STAG3Q9UJ98 1225 aa19.8■□□□□ 0.76
SMARCE1-206ENST00000447024 GABBR2O75899 941 aa19.77■□□□□ 0.76
SMARCE1-206ENST00000447024 CD44P16070 742 aaKnown RBP19.73■□□□□ 0.75
SMARCE1-206ENST00000447024 CREBZFQ9NS37 354 aa19.71■□□□□ 0.75
SMARCE1-206ENST00000447024 PROM2Q8N271 834 aa19.46■□□□□ 0.71
SMARCE1-206ENST00000447024 ZRANB1Q9UGI0 708 aa19.45■□□□□ 0.7
SMARCE1-206ENST00000447024 ZNF579Q8NAF0 562 aaKnown RBP19.43■□□□□ 0.7
SMARCE1-206ENST00000447024 CLCN6P51797 869 aa19.42■□□□□ 0.7
SMARCE1-206ENST00000447024 MNX1P50219 401 aaPredicted RBP19.37■□□□□ 0.69
SMARCE1-206ENST00000447024 POTEIP0CG38 1075 aa19.36■□□□□ 0.69
SMARCE1-206ENST00000447024 NPM1P06748 294 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMARCE1-206ENST00000447024 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
SMARCE1-206ENST00000447024 LHX8Q68G74 356 aa19.26■□□□□ 0.67
SMARCE1-206ENST00000447024 DCBLD2Q96PD2 775 aa19.23■□□□□ 0.67
SMARCE1-206ENST00000447024 GALR2O43603 387 aaPredicted RBP19.2■□□□□ 0.66
SMARCE1-206ENST00000447024 PHF12Q96QT6 1004 aa19.2■□□□□ 0.66
SMARCE1-206ENST00000447024 MIER1Q8N108 512 aa18.99■□□□□ 0.63
SMARCE1-206ENST00000447024 TSPYL2Q9H2G4 693 aaPredicted RBP18.99■□□□□ 0.63
SMARCE1-206ENST00000447024 PLEKHG5O94827 1062 aa18.98■□□□□ 0.63
SMARCE1-206ENST00000447024 FKBP8Q14318 412 aa18.95■□□□□ 0.62
SMARCE1-206ENST00000447024 MS4A3Q96HJ5 214 aa18.95■□□□□ 0.62
SMARCE1-206ENST00000447024 CCDC61Q9Y6R9 512 aa18.91■□□□□ 0.62
SMARCE1-206ENST00000447024 PLCD3Q8N3E9 789 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms