RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PRKCHP24723 683 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 TM4SF1P30408 202 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PNPLA4P41247 253 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 GSTM5P46439 218 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 MTAPQ13126 283 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SSPNQ14714 243 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PLCB4Q15147 1175 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 AAK1Q2M2I8 961 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CD300EQ496F6 205 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 RPUSD3Q6P087 351 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 DENND1BQ6P3S1 775 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 KLHL24Q6TFL4 600 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 IKBIPQ70UQ0 350 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CARFQ8N187 725 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 Q8NA96 180 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 ETNPPLQ8TBG4 499 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 NPIPB3Q92617 1050 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM120BQ96EK7 910 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 VMP1Q96GC9 406 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PIGSQ96S52 555 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 BAG1Q99933 345 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 INTS2Q9H0H0 1204 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 MROH8Q9H579 483 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SEMA4BQ9NPR2 832 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CFDP1Q9UEE9 299 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SUN2Q9UH99 717 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 NEU2Q9Y3R4 380 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 USP15Q9Y4E8 981 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SNX8Q9Y5X2 465 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM90A7PA6NKC0 464 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZAR1LA6NP61 321 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM90A22PA8MWA6 464 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM90A12PA8MX19 464 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM90A23PA8MXZ1 464 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 BIN1O00499 593 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 TSPAN4O14817 238 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 VILLO15195 856 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 RECQL4O94761 1208 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZFPL1O95159 310 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CR2P20023 1033 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 IL11P20809 199 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 ICAM3P32942 547 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 TRPC1P48995 793 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PDE6CP51160 858 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SNX16P57768 344 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 RBM6P78332 1123 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CDC16Q13042 620 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PPP2R5CQ13362 524 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PSMD6Q15008 389 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PPP2R5BQ15173 497 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 ELAVL1Q15717 326 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SLC10A5Q5PT55 438 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 UBAP2Q5T6F2 1119 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM90A2PQ658T7 463 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SLC9A4Q6AI14 798 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 GRHL2Q6ISB3 625 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CCDC144NLQ6NUI1 221 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CCDC73Q6ZRK6 1079 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 KRT74Q7RTS7 529 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZNF761Q86XN6 746 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SSH3Q8TE77 659 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 RUFY2Q8WXA3 655 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 ARRDC3Q96B67 414 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PERPQ96FX8 193 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 LENG8Q96PV6 779 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 FMNL2Q96PY5 1086 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 PPP1R10Q96QC0 940 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 NR1H4Q96RI1 486 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 EIF3CQ99613 913 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 LBHD1Q9BQE6 289 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CCDC94Q9BW85 323 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 FTOQ9C0B1 505 aaKnown RBP eCLIP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CLPBQ9H078 707 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 MUC13Q9H3R2 512 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 SUDS3Q9H7L9 328 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 NRDE2Q9H7Z3 1164 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 HECAQ9UBI9 543 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 CLCA2Q9UQC9 943 aa4.43□□□□□ -1.7
CDC42BPA-207ENST00000441725 GTPBP10A4D1E9 387 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 SH2D7A6NKC9 451 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 E7ENX8 843 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 F5H697 171 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 MPHOSPH10O00566 681 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 FFAR3O14843 346 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 IPO13O94829 963 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 APOA4P06727 396 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 JUNBP17275 347 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 FGFR4P22455 802 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 PSMA4P25789 261 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 MTHFSP49914 203 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 ANXA11P50995 505 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 RPL15P61313 204 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 TAP2Q03519 686 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 CHAF1BQ13112 559 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 BFSP2Q13515 415 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 CLCA4Q14CN2 919 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 AASDHQ4L235 1098 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 C16orf89Q6UX73 402 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 ARHGEF25Q86VW2 580 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 RAB11FIP4Q86YS3 637 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms