RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 XAB2Q9HCS7 855 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 FLRT1Q9NZU1 646 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 ZFATQ9P243 1243 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 SLC17A7Q9P2U7 560 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 ZNF212Q9UDV6 495 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 DNAJB4Q9UDY4 337 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 ZC3H7BQ9UGR2 993 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 PCSK1NQ9UHG2 260 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 CYTH4Q9UIA0 394 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 PLLPQ9Y342 182 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 PRRC2BQ5JSZ5 2229 aaKnown RBP9□□□□□ -0.97
GABPB1-205ENST00000429662 WDR81Q562E7 1941 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 VPS13AQ96RL7 3174 aa9□□□□□ -0.97
GABPB1-205ENST00000429662 A0A0G2JND7 137 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 TCRBV7S3A2A0A539 114 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 WDR91A4D1P6 747 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 TRIM49D1C9J1S8 452 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 INO80B-WBP1J3KQ70 363 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 HGSO14964 777 aaPredicted RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 GCATO75600 419 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 ZBED1O96006 694 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 APOEP02649 317 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 MLNP12872 115 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 PDGFRAP16234 1089 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 CYP2B6P20813 491 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 CRHR1P34998 444 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 PTDSS1P48651 473 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 IRX1P78414 480 aaPredicted RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 OCRLQ01968 901 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 MBTD1Q05BQ5 628 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 SLC34A1Q06495 639 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 EFTUD2Q15029 972 aaKnown RBP eCLIP8.99□□□□□ -0.971e-5■□□□□ 9
GABPB1-205ENST00000429662 PLEKHG4Q58EX7 1191 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 MORN1Q5T089 497 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 IRGCQ6NXR0 463 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 KYAT3Q6YP21 454 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 CRLF3Q8IUI8 442 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 HACE1Q8IYU2 909 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 PLD5Q8N7P1 536 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 C1orf127Q8N9H9 656 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 TRPV1Q8NER1 839 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 RFWD2Q8NHY2 731 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 GSDMBQ8TAX9 411 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 RXFP2Q8WXD0 754 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 TTC17Q96AE7 1141 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 E2F7Q96AV8 911 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 SERAC1Q96JX3 654 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 FAM111AQ96PZ2 611 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 SRPK1Q96SB4 655 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 FERMT1Q9BQL6 677 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 NT5C1AQ9BXI3 368 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 CADM1Q9BY67 442 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 INO80BQ9C086 356 aaPredicted RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 ELOVL4Q9GZR5 314 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 ZNF576Q9H609 170 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 KCNK13Q9HB14 408 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 USP29Q9HBJ7 922 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 RAB6BQ9NRW1 208 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 ETNK2Q9NVF9 386 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 SIRPGQ9P1W8 387 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 KANSL3Q9P2N6 904 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 STX18Q9P2W9 335 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 SAE1Q9UBE0 346 aaPredicted RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 NKX1-2Q9UD57 310 aaPredicted RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 SIX4Q9UIU6 781 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 DCTN4Q9UJW0 460 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 ANGPTL2Q9UKU9 493 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 DERAQ9Y315 318 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 C2CD2Q9Y426 696 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 TTLL3Q9Y4R7 772 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 FAM159BA6NKW6 160 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 LACTBL1A8MY62 500 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 HACD1B0YJ81 288 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 GOLGA8RI6L899 631 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 FCHO1O14526 889 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 NVLO15381 856 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 KCNN4O15554 427 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 BANF1O75531 89 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 CSDE1O75534 798 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 CIB2O75838 187 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 PSMG1O95456 288 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 CD48P09326 243 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 STAG3L1P0CL83 205 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 RARBP10826 455 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 MYL2P10916 166 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 FGFR1P11362 822 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 BGNP21810 368 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 SDC4P31431 198 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 MYH9P35579 1960 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 FDFT1P37268 417 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 YWHAZP63104 245 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 MRPS5P82675 430 aaKnown RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 KLC1Q07866 573 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 WASHC5Q12768 1159 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 TMEM132DQ14C87 1099 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 MUM1Q2TAK8 710 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 OR6B2Q6IFH4 312 aa8.99□□□□□ -0.97
GABPB1-205ENST00000429662 NET1Q7Z628 596 aaPredicted RBP8.99□□□□□ -0.97
GABPB1-205ENST00000429662 SESTD1Q86VW0 696 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms