RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 RAD23BP54727 409 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 HNRNPDQ14103 355 aaKnown RBP12.28□□□□□ -0.44
PLOD3-204ENST00000424135 RAB41Q5JT25 222 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 PDZD3Q86UT5 571 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 CADM4Q8NFZ8 388 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 HNRNPLLQ8WVV9 542 aaKnown RBP12.28□□□□□ -0.44
PLOD3-204ENST00000424135 PRCCQ92733 491 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-204ENST00000424135 TATDN2Q93075 761 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 CRELD1Q96HD1 420 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 ZDHHC5Q9C0B5 715 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 TM7SF3Q9NS93 570 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 TRAF3IP3Q9Y228 551 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 FRMD4BQ9Y2L6 1034 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 SNX11Q9Y5W9 270 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 PTPRBP23467 1997 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
PLOD3-204ENST00000424135 CABIN1Q9Y6J0 2220 aa12.27□□□□□ -0.44
PLOD3-204ENST00000424135 FAM149AA5PLN7 773 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 DKK1O94907 266 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 EPHX1P07099 455 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 NR2F2P24468 414 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 MATKP42679 507 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 PSEN1P49768 467 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 YWHAGP61981 247 aaKnown RBP eCLIP12.27□□□□□ -0.45
PLOD3-204ENST00000424135 COG7P83436 770 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 PTPRNQ16849 979 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 SERPINA13PQ6UXR4 307 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 DBX2Q6ZNG2 339 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 FMNL3Q8IVF7 1028 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 FAM217AQ8IXS0 508 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 FAM186BQ8IYM0 893 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 WFDC5Q8TCV5 224 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 DDI1Q8WTU0 396 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 SNX19Q92543 992 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 ORAI3Q9BRQ5 295 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 NUP58Q9BVL2 599 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 ULBP1Q9BZM6 244 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 CCDC86Q9H6F5 360 aaKnown RBP12.27□□□□□ -0.45
PLOD3-204ENST00000424135 CISHQ9NSE2 258 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 SFMBT1Q9UHJ3 866 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.27□□□□□ -0.45
PLOD3-204ENST00000424135 ZNF510Q9Y2H8 683 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 NFE2L3Q9Y4A8 694 aa12.27□□□□□ -0.45
PLOD3-204ENST00000424135 MAPK13O15264 365 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 MSI1O43347 362 aaKnown RBP12.26□□□□□ -0.45
PLOD3-204ENST00000424135 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
PLOD3-204ENST00000424135 GABBR2O75899 941 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 OXTRP30559 389 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 CHKAP35790 457 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 TKTL1P51854 596 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 CAMK2GQ13555 558 aaPredicted RBP12.26□□□□□ -0.45
PLOD3-204ENST00000424135 TRIP4Q15650 581 aaPredicted RBP12.26□□□□□ -0.45
PLOD3-204ENST00000424135 ZCWPW2Q504Y3 356 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 RSRC2Q7L4I2 434 aaKnown RBP12.26□□□□□ -0.45
PLOD3-204ENST00000424135 TMPRSS7Q7RTY8 843 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 TADA2BQ86TJ2 420 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 ADIPOR2Q86V24 386 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 CPXM2Q8N436 756 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 OR2T3Q8NH03 318 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 RHBDD1Q8TEB9 315 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 EDEM1Q92611 657 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 DCLK3Q9C098 648 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 TMEM245Q9H330 911 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 TMEM8AQ9HCN3 771 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 APOBEC2Q9Y235 224 aaKnown RBP12.26□□□□□ -0.45
PLOD3-204ENST00000424135 HPSEQ9Y251 543 aa12.26□□□□□ -0.45
PLOD3-204ENST00000424135 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.26□□□□□ -0.45
PLOD3-204ENST00000424135 MUC22E2RYF6 1773 aaPredicted RBP12.25□□□□□ -0.45
PLOD3-204ENST00000424135 GOLGA4Q13439 2230 aaKnown RBP12.25□□□□□ -0.45
PLOD3-204ENST00000424135 ASXL3Q9C0F0 2248 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 GOLGA6L7A0A1B0GV03 622 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 YJEFN3A6XGL0 299 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 E7ENQ6 273 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 NPC1O15118 1278 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 ZNF883P0CG24 379 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 ACADMP11310 421 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 CLDN6P56747 220 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 RPS14P62263 151 aaKnown RBP12.25□□□□□ -0.45
PLOD3-204ENST00000424135 IL9RQ01113 521 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 CYP4F3Q08477 520 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 PDE4CQ08493 712 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 EIF4HQ15056 248 aaKnown RBP12.25□□□□□ -0.45
PLOD3-204ENST00000424135 NFIL3Q16649 462 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 GOLGA7BQ2TAP0 167 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 CCDC157Q569K6 752 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 PRAMEF14Q5SWL7 426 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 ARHGAP17Q68EM7 881 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 PM20D1Q6GTS8 502 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 INTS8Q75QN2 995 aaKnown RBP12.25□□□□□ -0.45
PLOD3-204ENST00000424135 SMYD4Q8IYR2 804 aaPredicted RBP12.25□□□□□ -0.45
PLOD3-204ENST00000424135 ANKRD52Q8NB46 1076 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 UBA3Q8TBC4 463 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 UCMAQ8WVF2 138 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 MYEOVQ96EZ4 313 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 TMEM176AQ96HP8 235 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 IMPG2Q9BZV3 1241 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 LHX5Q9H2C1 402 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 TM9SF3Q9HD45 589 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 PRSS16Q9NQE7 514 aa12.25□□□□□ -0.45
PLOD3-204ENST00000424135 ABCB8Q9NUT2 735 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms