RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 MSRAQ9UJ68 235 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 DNPEPQ9ULA0 475 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 KRT6AP02538 564 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 KRT6BP04259 564 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 OR56A5P0C7T3 313 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 SMIM10L2AP0DMW4 78 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 SMIM10L2BP0DMW5 78 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 YWHAQP27348 245 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 GTF2E2P29084 291 aaKnown RBP8.68□□□□□ -1.02
CTNND1-206ENST00000415361 KRT6CP48668 564 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 PEX6Q13608 980 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 C11orf63Q6NUN7 778 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 PRMT9Q6P2P2 845 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 TRPM8Q7Z2W7 1104 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 JADE3Q92613 823 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 VPS33AQ96AX1 596 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 CNDP1Q96KN2 507 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 KRT84Q9NSB2 600 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 AP3M1Q9Y2T2 418 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 TIMM13Q9Y5L4 95 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-206ENST00000415361 SNCAIPQ9Y6H5 919 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 CNTNAP2Q9UHC6 1331 aa8.68□□□□□ -1.02
CTNND1-206ENST00000415361 B2RBV5 119 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 C4BPBP20851 252 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 RRM1P23921 792 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 KRR1Q13601 381 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CCNG2Q16589 344 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 MARC1Q5VT66 337 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 BTNL9Q6UXG8 535 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 METTL3Q86U44 580 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 IFNEQ86WN2 208 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 DDX42Q86XP3 938 aaKnown RBP eCLIP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 RIN3Q8TB24 985 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 MCOLN3Q8TDD5 553 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 POP1Q99575 1024 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CIPCQ9C0C6 399 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 IGFLR1Q9H665 355 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CISHQ9NSE2 258 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 SPG21Q9NZD8 308 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 MAPRE3Q9UPY8 281 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 RIPK3Q9Y572 518 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 MEIS2O14770 477 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 GUCY1B2O75343 617 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 MTA2O94776 668 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 PCDH8O95206 1070 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ZNF7P17097 686 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 HALP42357 657 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 NAA20P61599 178 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 GNA13Q14344 377 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 APLFQ8IW19 511 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 TMEM199Q8N511 208 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 TMEM237Q96Q45 408 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CCT8L2Q96SF2 557 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 IARS2Q9NSE4 1012 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 PLAGL2Q9UPG8 496 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 AFDNP55196 1824 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 RAD51BO15315 384 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ADCY6O43306 1168 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 RAMP2O60895 175 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CHRNB3Q05901 458 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 GRTP1Q5TC63 336 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 GJB7Q6PEY0 223 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 MAGEB18Q96M61 343 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 PANX3Q96QZ0 392 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 VAT1Q99536 393 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 THTPAQ9BU02 230 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ELOVL6Q9H5J4 265 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 BATF3Q9NR55 127 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ADAM30Q9UKF2 790 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 FAM50BQ9Y247 325 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ACOT9Q9Y305 439 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 H3BMM5 538 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CBX4O00257 560 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 PCNAP12004 261 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CRABP2P29373 138 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CYP2C18P33260 490 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ATXN3P54252 364 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ALDH6A1Q02252 535 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 IYDQ6PHW0 289 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ACTRT1Q8TDG2 376 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 SEC16BQ96JE7 1060 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CNBD2Q96M20 576 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ASB2Q96Q27 587 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 SIKE1Q9BRV8 207 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 EPS8L2Q9H6S3 715 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 NCKIPSDQ9NZQ3 722 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 MARCOQ9UEW3 520 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 NFASCO94856 1347 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 OPLAHO14841 1288 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 ATP5BP06576 529 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CLK1P49759 484 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CCNG1P51959 295 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 GYS2P54840 703 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 BTKQ06187 659 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 MGAT5Q09328 741 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 CDH17Q12864 832 aa8.67□□□□□ -1.02
CTNND1-206ENST00000415361 USP39Q53GS9 565 aaKnown RBP8.67□□□□□ -1.02
CTNND1-206ENST00000415361 SPANXN3Q5MJ09 141 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms