RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 MYO1HQ8N1T3 1032 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 EDEM1Q92611 657 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 ALG13Q9NP73 1137 aaKnown RBP17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 NT5MQ9NPB1 228 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 SPG21Q9NZD8 308 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 MIPP30301 263 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 KBTBD12Q3ZCT8 623 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 HABP4Q5JVS0 413 aaKnown RBP17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 TRIM48Q8IWZ4 208 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 HS6ST3Q8IZP7 471 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 FBXO25Q8TCJ0 367 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 ADAM33Q9BZ11 813 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 DNPEPQ9ULA0 475 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 IGLV3-22A0A075B6J6 115 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 YIPF3Q9GZM5 350 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 CYLDQ9NQC7 956 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 UBA2Q9UBT2 640 aaPredicted RBP17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 ZNF112Q9UJU3 913 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 CCND1P24385 295 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 SPDYCQ5MJ68 293 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 BRMS1LQ5PSV4 323 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 PPP1R15BQ5SWA1 713 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 CAPRIN2Q6IMN6 1127 aaKnown RBP17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 SCUBE3Q8IX30 993 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 PURBQ96QR8 312 aaKnown RBP17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 TGFB1I1O43294 461 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 ASGR1P07306 291 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 ACADMP11310 421 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 POU4F1Q01851 419 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 PSMD5Q16401 504 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 UGCGQ16739 394 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 NT5DC3Q86UY8 548 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 FBXO36Q8NEA4 188 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 GMLQ99445 158 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 FAM118BQ9BPY3 351 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 OSBPL1AQ9BXW6 950 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 BATF3Q9NR55 127 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 LNPEPQ9UIQ6 1025 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 A0A0U1RQJ8 604 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 XPO1O14980 1071 aaKnown RBP17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 ZW10O43264 779 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 E2F6O75461 281 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 CAPN15O75808 1086 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 TRUB2O95900 331 aaKnown RBP17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 CDC25CP30307 473 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 KCNA1Q09470 495 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 SZRD1Q7Z422 152 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 IFNL1Q8IU54 200 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 NCKAP1Q9Y2A7 1128 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 EOMESO95936 686 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 CTNNB1P35222 781 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 ADCK2Q7Z695 626 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 LGI2Q8N0V4 545 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 SNX31Q8N9S9 440 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 CATSPER1Q8NEC5 780 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 FICDQ9BVA6 458 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 NPHS2Q9NP85 383 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 GID8Q9NWU2 228 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 FAM153AQ9UHL3 310 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 DNALI1O14645 258 aaPredicted RBP17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 IL10P22301 178 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 EEF1DP3Q658K8 133 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 MON1AQ86VX9 555 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 MRPL1Q9BYD6 325 aaKnown RBP17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 VANGL2Q9ULK5 521 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 CDYLQ9Y232 598 aa17.24■□□□□ 0.35
PCDHA13-202ENST00000409494 MAPK1P28482 360 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 ARSHQ5FYA8 562 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 SCARA3Q6AZY7 606 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 PIP4K2CQ8TBX8 421 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 CD99L2Q8TCZ2 262 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 KCNK16Q96T55 309 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 RBPJLQ9UBG7 517 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 ACOT9Q9Y305 439 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 SPACA6W5XKT8 324 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 GRK2P25098 689 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 PGM1P36871 562 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 ANXA11P50995 505 aaKnown RBP17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 MPP3Q13368 585 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 C2CD6Q53TS8 623 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 EPS8L3Q8TE67 593 aaKnown RBP17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 ACSF2Q96CM8 615 aaPredicted RBP17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 NTPCRQ9BSD7 190 aaKnown RBP17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 ILKAPQ9H0C8 392 aaPredicted RBP17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 ADA2Q9NZK5 511 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 DNAJC8O75937 253 aaPredicted RBP17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 ALDH1A2O94788 518 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 HTR7P34969 479 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 SPANXN3Q5MJ09 141 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 SMYD5Q6GMV2 418 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 PIGZQ86VD9 579 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 PPP1R16AQ96I34 528 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 PGLYRP2Q96PD5 576 aa17.23■□□□□ 0.35
PCDHA13-202ENST00000409494 TTPALQ9BTX7 342 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms