RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ACAP1Q15027 740 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 HLA-BQ31612 363 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 RAB41Q5JT25 222 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 LAYNQ6UX15 382 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 SERPINA13PQ6UXR4 307 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 INTS8Q75QN2 995 aaKnown RBP12.48□□□□□ -0.41
LINC00544-201ENST00000400540 RSRC2Q7L4I2 434 aaKnown RBP12.48□□□□□ -0.41
LINC00544-201ENST00000400540 GLRX5Q86SX6 157 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 PIGZQ86VD9 579 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 FAM217AQ8IXS0 508 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 CPXM2Q8N436 756 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 C1orf216Q8TAB5 229 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 BAHD1Q8TBE0 780 aaPredicted RBP12.48□□□□□ -0.41
LINC00544-201ENST00000400540 CYB5D2Q8WUJ1 264 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 SNX19Q92543 992 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 HEXIM2Q96MH2 286 aaKnown RBP12.48□□□□□ -0.41
LINC00544-201ENST00000400540 CDK5RAP1Q96SZ6 601 aaKnown RBP12.48□□□□□ -0.41
LINC00544-201ENST00000400540 DCLK3Q9C098 648 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 C6orf106Q9H6K1 298 aaPredicted RBP12.48□□□□□ -0.41
LINC00544-201ENST00000400540 TMEM8AQ9HCN3 771 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 TM7SF3Q9NS93 570 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 CISHQ9NSE2 258 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 BTBD3Q9Y2F9 522 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
LINC00544-201ENST00000400540 APC2O95996 2303 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 TSPAN3O60637 253 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 CYBBP04839 570 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 ATXN1LP0C7T5 689 aaKnown RBP12.47□□□□□ -0.41
LINC00544-201ENST00000400540 ACADMP11310 421 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 KRT13P13646 458 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 HOXD9P28356 352 aaPredicted RBP12.47□□□□□ -0.41
LINC00544-201ENST00000400540 OXTRP30559 389 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 ACSL1P33121 698 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 CSNK1EP49674 416 aaKnown RBP12.47□□□□□ -0.41
LINC00544-201ENST00000400540 SGSHP51688 502 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 TKTL1P51854 596 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 ZNF132P52740 706 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 RAD23BP54727 409 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 EIF4HQ15056 248 aaKnown RBP12.47□□□□□ -0.41
LINC00544-201ENST00000400540 NFIL3Q16649 462 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 COL28A1Q2UY09 1125 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 ZC3H3Q8IXZ2 948 aaKnown RBP12.47□□□□□ -0.41
LINC00544-201ENST00000400540 EEF2KMTQ96G04 330 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 TMEM176AQ96HP8 235 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 NUP58Q9BVL2 599 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 ULBP1Q9BZM6 244 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 CCDC86Q9H6F5 360 aaKnown RBP12.47□□□□□ -0.41
LINC00544-201ENST00000400540 SFMBT1Q9UHJ3 866 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 STRIP2Q9ULQ0 834 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 APOBEC2Q9Y235 224 aaKnown RBP12.47□□□□□ -0.41
LINC00544-201ENST00000400540 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
LINC00544-201ENST00000400540 ACACAQ13085 2346 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 KNL1Q8NG31 2342 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 COL5A1P20908 1838 aaPredicted RBP12.46□□□□□ -0.41
LINC00544-201ENST00000400540 CABIN1Q9Y6J0 2220 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 RHOBTB3O94955 611 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 ZNF883P0CG24 379 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 HLA-FP30511 346 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 ARID5AQ03989 594 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 CAMK2GQ13555 558 aaPredicted RBP12.46□□□□□ -0.41
LINC00544-201ENST00000400540 TRIP4Q15650 581 aaPredicted RBP12.46□□□□□ -0.41
LINC00544-201ENST00000400540 KIF19Q2TAC6 998 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 GOLGA7BQ2TAP0 167 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 ZCWPW2Q504Y3 356 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 FNDC3BQ53EP0 1204 aaKnown RBP12.46□□□□□ -0.41
LINC00544-201ENST00000400540 KRT39Q6A163 491 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 PDZD3Q86UT5 571 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 FMNL3Q8IVF7 1028 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 CCDC150Q8NCX0 1101 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 OR2T3Q8NH03 318 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 WFDC5Q8TCV5 224 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 EDEM1Q92611 657 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 TATDN2Q93075 761 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 SNX21Q969T3 373 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 PLD4Q96BZ4 506 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 LHX5Q9H2C1 402 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 TMEM245Q9H330 911 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 RAXQ9Y2V3 346 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 SNX11Q9Y5W9 270 aa12.46□□□□□ -0.41
LINC00544-201ENST00000400540 DOCK9Q9BZ29 2069 aa12.46□□□□□ -0.42
LINC00544-201ENST00000400540 GOLGA4Q13439 2230 aaKnown RBP12.45□□□□□ -0.42
LINC00544-201ENST00000400540 KCNK3O14649 394 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 MSI1O43347 362 aaKnown RBP12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ZBED1O96006 694 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 CMA1P23946 247 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 PSMC2P35998 433 aaKnown RBP12.45□□□□□ -0.42
LINC00544-201ENST00000400540 MXI1P50539 228 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 NDUFA8P51970 172 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 PDE4CQ08493 712 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ADIGQ0VDE8 80 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 DPYDQ12882 1025 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ADAM9Q13443 819 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 PTPRNQ16849 979 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 KCNT1Q5JUK3 1230 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ARHGAP17Q68EM7 881 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 PM20D1Q6GTS8 502 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms