RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 NRDE2Q9H7Z3 1164 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 VTA1Q9NP79 307 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 TCF7L2Q9NQB0 619 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 DDX20Q9UHI6 824 aaKnown RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 KIDINS220Q9ULH0 1771 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 DDHD2O94830 711 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 BGNP21810 368 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 ZNF157P51786 506 aaPredicted RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 TGFB2P61812 414 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 AMPD2Q01433 879 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 DGUOKQ16854 277 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 IRGCQ6NXR0 463 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 CDK20Q8IZL9 346 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 C19orf18Q8NEA5 215 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 LRCH1Q9Y2L9 728 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 SF3B1O75533 1304 aaKnown RBP eCLIP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 STK25O00506 426 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 RGS14O43566 566 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 FSBPO95073 299 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 CTSHP09668 335 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 LAMTOR4Q0VGL1 99 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 SAMD4BQ5PRF9 694 aaKnown RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 RNF43Q68DV7 783 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 ARHGAP17Q68EM7 881 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 KCNMB4Q86W47 210 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 SPATA17Q96L03 361 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 PARVBQ9HBI1 364 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 C8orf4Q9NR00 106 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 GPRC5DQ9NZD1 345 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 NAALADL1Q9UQQ1 740 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 TNPO3Q9Y5L0 923 aaKnown RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 SNX13Q9Y5W8 968 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM205AQ6ZU69 1335 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 hCG_2014768A0A024R1R8 64 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 CENPXA8MT69 81 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM20BO75063 409 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 BLVRAP53004 296 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 FUT11Q495W5 492 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 GALNTL6Q49A17 601 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 TBCELQ5QJ74 424 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 CCDC81Q6ZN84 652 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 MREGQ8N565 214 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 GEMIN8Q9NWZ8 242 aaKnown RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ABI2Q9NYB9 513 aaPredicted RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 UMODL1Q5DID0 1318 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM237AA0A1B0GTK4 181 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 SYNDIG1LA6NDD5 238 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 NFIBO00712 420 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ATP9AO75110 1047 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 PMPCBO75439 489 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 MICAL2O94851 1124 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 OR56A5P0C7T3 313 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 TFE3P19532 575 aaPredicted RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 CHRNA5P30532 468 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 RHOAP61586 193 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ST3GAL1Q11201 340 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 IZUMO2Q6UXV1 221 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 METTL3Q86U44 580 aaKnown RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 SLC47A2Q86VL8 602 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 LRRC49Q8IUZ0 686 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 HTR3CQ8WXA8 447 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 PANX3Q96QZ0 392 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 MRPL9Q9BYD2 267 aaKnown RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 NMRK2Q9NPI5 230 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ENTPD7Q9NQZ7 604 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ARHGAP20Q9P2F6 1191 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 SALL3Q9BXA9 1300 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 CCDC154A6NI56 674 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 CYP1A2P05177 515 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ANXA6P08133 673 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 SGO1Q5FBB7 561 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 INTS5Q6P9B9 1019 aaKnown RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ZBTB49Q6ZSB9 765 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ULK2Q8IYT8 1036 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ZNF526Q8TF50 670 aaPredicted RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 RXFP2Q8WXD0 754 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 CATSPER2Q96P56 530 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 SLC25A23Q9BV35 468 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 KIAA1683Q9H0B3 1180 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 DEFB129Q9H1M3 183 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 SPON1Q9HCB6 807 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 CHST12Q9NRB3 414 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ADARB2Q9NS39 739 aaKnown RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 NINJ2Q9NZG7 142 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 NDUFAF1Q9Y375 327 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 WFS1O76024 890 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ZNF7P17097 686 aaPredicted RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 XIAPP98170 497 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ALDH6A1Q02252 535 aaKnown RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 GNA13Q14344 377 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 SQLEQ14534 574 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 OASLQ15646 514 aaKnown RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 FBXO47Q5MNV8 452 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 IKBIPQ70UQ0 350 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 ACOT1Q86TX2 421 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 MAGEC3Q8TD91 643 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 GDPD5Q8WTR4 605 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 RMND5BQ96G75 393 aaPredicted RBP8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 QRFPRQ96P65 431 aa8.56□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM118BQ9BPY3 351 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms