RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 E4F1Q66K89 784 aaPredicted RBP13.21□□□□□ -0.29
CAST-206ENST00000395812 PRR23BQ6ZRT6 265 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 IRF7Q92985 503 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 RBM15Q96T37 977 aaKnown RBP eCLIP13.21□□□□□ -0.298e-7■■■□□ 15.1
CAST-206ENST00000395812 HAUS8Q9BT25 410 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 SLC13A1Q9BZW2 595 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 LRRC72A6NJI9 287 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 TIMP1P01033 207 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 GNSP15586 552 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 GDI1P31150 447 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 WASP42768 502 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 VCPP55072 806 aaKnown RBP13.21□□□□□ -0.29
CAST-206ENST00000395812 KDSRQ06136 332 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 MTF1Q14872 753 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 ZKSCAN8Q15776 578 aaPredicted RBP13.21□□□□□ -0.29
CAST-206ENST00000395812 E2F4Q16254 413 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 TMCO4Q5TGY1 634 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 PRPF39Q86UA1 669 aaKnown RBP13.21□□□□□ -0.29
CAST-206ENST00000395812 SERINC5Q86VE9 423 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 ANKMY2Q8IV38 441 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 GLMNQ92990 594 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 E2F7Q96AV8 911 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 FAM118BQ9BPY3 351 aa13.21□□□□□ -0.29
CAST-206ENST00000395812 GRM6O15303 877 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 GLI1P08151 1106 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 TKTP29401 623 aaKnown RBP13.21□□□□□ -0.3
CAST-206ENST00000395812 SKP1P63208 163 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 NNTQ13423 1086 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 ACAD11Q709F0 780 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 TMEM192Q8IY95 271 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 EXD1Q8NHP7 514 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 HERVK_113Q902F9 699 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 VAT1Q99536 393 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 MED4Q9NPJ6 270 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 XPNPEP1Q9NQW7 623 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 TRHDEQ9UKU6 1024 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 NEU2Q9Y3R4 380 aa13.21□□□□□ -0.3
CAST-206ENST00000395812 URB1O60287 2271 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 CLUHO75153 1309 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 MRPS5P82675 430 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 SPARCL1Q14515 664 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 INSCQ1MX18 579 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 BRMS1LQ5PSV4 323 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 NLRP9Q7RTR0 991 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 TSTD1Q8NFU3 115 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 BSNDQ8WZ55 320 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 PNKPQ96T60 521 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 FAM129AQ9BZQ8 928 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 NMRK1Q9NWW6 199 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 GOLGA4Q13439 2230 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 GLI3P10071 1580 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 CLDN11O75508 207 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 NCF2P19878 526 aaPredicted RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 AMPD1P23109 780 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 HSPA9P38646 679 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 SPDYAQ5MJ70 313 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 SIAH1Q8IUQ4 282 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 MYO1HQ8N1T3 1032 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 CCDC33Q8N5R6 958 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 AUTS2Q8WXX7 1259 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 ZBED3Q96IU2 234 aaPredicted RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 NECTIN4Q96NY8 510 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 APOL2Q9BQE5 337 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 ZSWIM1Q9BR11 485 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 MRPL45Q9BRJ2 306 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 RABEP2Q9H5N1 569 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 PRDM16Q9HAZ2 1276 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 WWOXQ9NZC7 414 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 CPQQ9Y646 472 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 ENPP3O14638 875 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 TRDMT1O14717 391 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 CTIFO43310 598 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 SUN1O94901 812 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 ZNF7P17097 686 aaPredicted RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 RAP1GDS1P52306 607 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 DLG4P78352 724 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 TGM3Q08188 693 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 DENND1BQ6P3S1 775 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 ZNF438Q7Z4V0 828 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 TRAPPC5Q8IUR0 188 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 DDIASQ8IXT1 998 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 GMIPQ9P107 970 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 SNX12Q9UMY4 172 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 PTPRJQ12913 1337 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 AARSP49588 968 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAST-206ENST00000395812 RCN2Q14257 317 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
CAST-206ENST00000395812 CACNA2D3Q8IZS8 1091 aa13.2□□□□□ -0.3
CAST-206ENST00000395812 ARL14EPQ8N8R7 260 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms