RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCAF11-204ENST00000395454 TMEM30AQ9NV96 361 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 UNC80Q8N2C7 3258 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 DAB1O75553 588 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 EPCAMP16422 314 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 IL4RP24394 825 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 ITGA8P53708 1063 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 OTUD4Q01804 1114 aaKnown RBP15.68■□□□□ 0.1
SCAF11-204ENST00000395454 TFDP2Q14188 446 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 DPYSL2Q16555 572 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 DUSP6Q16828 381 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 TCEAL5Q5H9L2 206 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 CEP85LQ5SZL2 805 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 GPR153Q6NV75 609 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 LILRA6Q6PI73 481 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 VSTM1Q6UX27 236 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 MICALL1Q8N3F8 863 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 KREMEN2Q8NCW0 462 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 CLEC4CQ8WTT0 213 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 FAM118BQ9BPY3 351 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 ZNF670Q9BS34 389 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 ADAM33Q9BZ11 813 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 ADAM7Q9H2U9 754 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 FBXW11Q9UKB1 542 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 MTCH2Q9Y6C9 303 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 MTCL1Q9Y4B5 1905 aaKnown RBP15.68■□□□□ 0.1
SCAF11-204ENST00000395454 SHOX2O60902 331 aaPredicted RBP15.68■□□□□ 0.1
SCAF11-204ENST00000395454 ADCY8P40145 1251 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 MATKP42679 507 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 TUFMP49411 452 aaKnown RBP15.68■□□□□ 0.1
SCAF11-204ENST00000395454 GPR15P49685 360 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 SKOR1P84550 965 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 DDR2Q16832 855 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 RAB41Q5JT25 222 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 AGBL2Q5U5Z8 902 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 PSTKQ8IV42 348 aaKnown RBP15.68■□□□□ 0.1
SCAF11-204ENST00000395454 MAP7D3Q8IWC1 876 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 TCEAL8Q8IYN2 117 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 SLC7A14Q8TBB6 771 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 HSPH1Q92598 858 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 ZBTB9Q96C00 473 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 RNF157Q96PX1 679 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 SLC2A13Q96QE2 648 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 SMOQ99835 787 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 SEMA4AQ9H3S1 761 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 CSNK1G1Q9HCP0 422 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 DMAP1Q9NPF5 467 aaPredicted RBP15.68■□□□□ 0.1
SCAF11-204ENST00000395454 MAN1C1Q9NR34 630 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 ZNF148Q9UQR1 794 aa15.68■□□□□ 0.1
SCAF11-204ENST00000395454 DNALI1O14645 258 aaPredicted RBP15.67■□□□□ 0.1
SCAF11-204ENST00000395454 TRIM66O15016 1216 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 RIPK2O43353 540 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 FBXO21O94952 628 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 C8AP07357 584 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 MYZAPP0CAP1 466 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 HAPLN1P10915 354 aaPredicted RBP15.67■□□□□ 0.1
SCAF11-204ENST00000395454 MAGEA11P43364 429 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 CDH6P55285 790 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 MRPS5P82675 430 aaKnown RBP15.67■□□□□ 0.1
SCAF11-204ENST00000395454 ATP11AP98196 1134 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 ADIGQ0VDE8 80 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 NOMO1Q15155 1222 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 SDHAF4Q5VUM1 108 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 SLC9A4Q6AI14 798 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 CEP128Q6ZU80 1094 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 CROCCP2Q86T23 111 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 DEFB123Q8N688 67 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 GLIS1Q8NBF1 620 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 GPR152Q8TDT2 470 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 CDCA3Q99618 268 aaPredicted RBP15.67■□□□□ 0.1
SCAF11-204ENST00000395454 SNRNP25Q9BV90 132 aaKnown RBP15.67■□□□□ 0.1
SCAF11-204ENST00000395454 PHACTR1Q9C0D0 580 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 PCDH18Q9HCL0 1135 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCAF11-204ENST00000395454 ANAPC5Q9UJX4 755 aa15.67■□□□□ 0.1
SCAF11-204ENST00000395454 GOLGA6L10A6NI86 522 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 LCP1P13796 627 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 ALDH1A3P47895 512 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 DMTNQ08495 405 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 SLC25A52Q3SY17 297 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 OTUD1Q5VV17 481 aaPredicted RBP15.66■□□□□ 0.1
SCAF11-204ENST00000395454 IZUMO3Q5VZ72 239 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 DENND2CQ68D51 928 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 CCDC149Q6ZUS6 474 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 ZCCHC9Q8N567 271 aaKnown RBP15.66■□□□□ 0.1
SCAF11-204ENST00000395454 STKLD1Q8NE28 680 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 ZMIZ2Q8NF64 920 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 OR2W6PQ8NHA6 318 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 CALN1Q9BXU9 219 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 HSFX1Q9UBD0 423 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 DPP7Q9UHL4 492 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 MAFFQ9ULX9 164 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 SHOC2Q9UQ13 582 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 YIPF1Q9Y548 306 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 INSL5Q9Y5Q6 135 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 PECAM1P16284 738 aaPredicted RBP15.66■□□□□ 0.1
SCAF11-204ENST00000395454 TFE3P19532 575 aaPredicted RBP15.66■□□□□ 0.1
SCAF11-204ENST00000395454 TGM2P21980 687 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 TWF1Q12792 350 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 HYAL1Q12794 435 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms