RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 ACAT1P24752 427 aaKnown RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 ANXA11P50995 505 aaKnown RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 USP10Q14694 798 aaKnown RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 FAM83EQ2M2I3 478 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 KIF19Q2TAC6 998 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 E4F1Q66K89 784 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-203ENST00000393287 LCLAT1Q6UWP7 414 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 STRADAQ7RTN6 431 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 MYO1HQ8N1T3 1032 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SLC25A41Q8N5S1 370 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 WFIKKN2Q8TEU8 576 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 COG1Q8WTW3 980 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 OVCA2Q8WZ82 227 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 SGSM3Q96HU1 749 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 PHF24Q9UPV7 400 aa8.34□□□□□ -1.07
ATXN3-203ENST00000393287 PRPF4O43172 522 aaKnown RBP eCLIP8.34□□□□□ -1.08
ATXN3-203ENST00000393287 MPOP05164 745 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 HMOX2P30519 316 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 SCNN1AP37088 669 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 PRKCQQ04759 706 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 PAPD7Q5XG87 772 aaKnown RBP8.34□□□□□ -1.08
ATXN3-203ENST00000393287 PPP1R13LQ8WUF5 828 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 CORO1BQ9BR76 489 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 GTSE1Q9NYZ3 720 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 AKAP7Q9P0M2 348 aaPredicted RBP8.34□□□□□ -1.08
ATXN3-203ENST00000393287 CNTN3Q9P232 1028 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 GJD2Q9UKL4 321 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 GRID1Q9ULK0 1009 aa8.34□□□□□ -1.08
ATXN3-203ENST00000393287 TIMM13Q9Y5L4 95 aaPredicted RBP8.34□□□□□ -1.08
ATXN3-203ENST00000393287 BCORQ6W2J9 1755 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 ARL5CA6NH57 179 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 HDCP19113 662 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PPP2R2AP63151 447 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PTK2BQ14289 1009 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 EEF1DP3Q658K8 133 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 NUDCD3Q8IVD9 361 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 FAM71DQ8N9W8 422 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 EXT2Q93063 718 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 TBL1YQ9BQ87 522 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PLEKP08567 350 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 MYL2P10916 166 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PGAM1P18669 254 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 MAGEA4P43358 317 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 VCPP55072 806 aaKnown RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CDK16Q00536 496 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 SERINC5Q86VE9 423 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PHC3Q8NDX5 983 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 LRRC39Q96DD0 335 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 TOX2Q96NM4 488 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 XPNPEP1Q9NQW7 623 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 FAM153AQ9UHL3 310 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 SHOC2Q9UQ13 582 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 APOC4-APOC2K7ER74 178 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CBX4O00257 560 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 ATMINO43313 823 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 GLP2RO95838 553 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 APOC2P02655 101 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PMS1P54277 932 aaKnown RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 TBX2Q13207 712 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 ARID5BQ14865 1188 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PCSK7Q16549 785 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 AAK1Q2M2I8 961 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 ARMC12Q5T9G4 340 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 GRAMD4Q6IC98 578 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CXorf40AQ8TE69 158 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PANX3Q96QZ0 392 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 HNRNPABQ99729 332 aaKnown RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CIPCQ9C0C6 399 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CLPBQ9H078 707 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 LY75O60449 1722 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 A0A087X0T9 212 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 MAGEC1O60732 1142 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CILPO75339 1184 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 SRP72O76094 671 aaKnown RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 STAU1O95793 577 aaKnown RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 FAM228BP0C875 321 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 MSH3P20585 1137 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 SKP1P63208 163 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 MAPK7Q13164 816 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 XRCC4Q13426 336 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CBWD6Q4V339 395 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CCDC38Q502W7 563 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CBWD3Q5JTY5 395 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CBWD5Q5RIA9 395 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 LRRC8EQ6NSJ5 796 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PALB2Q86YC2 1186 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CMTR2Q8IYT2 770 aaKnown RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 TNIP2Q8NFZ5 429 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 LPPQ93052 612 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 ATP6V1G3Q96LB4 118 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 TKTL2Q9H0I9 626 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 UPF3AQ9H1J1 476 aaKnown RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 RETREG1Q9H6L5 497 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 TBK1Q9UHD2 729 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 PACSIN2Q9UNF0 486 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 WNK3Q9BYP7 1800 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 IFRD1O00458 451 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-203ENST00000393287 CLDN11O75508 207 aa8.33□□□□□ -1.08
ATXN3-203ENST00000393287 MTA2O94776 668 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms