RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TAF5Q15542 800 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 WSCD1Q658N2 575 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 PKN3Q6P5Z2 889 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 KCNV1Q6PIU1 500 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 FAM183BPQ6ZVS7 135 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 ZNF614Q8N883 585 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 FIG4Q92562 907 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 KREMEN1Q96MU8 473 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 TKTL2Q9H0I9 626 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 USE1Q9NZ43 259 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 TRMT6Q9UJA5 497 aaKnown RBP5.12□□□□□ -1.59
LTN1-202ENST00000389194 UBQLN1Q9UMX0 589 aaKnown RBP5.12□□□□□ -1.59
LTN1-202ENST00000389194 FRMPD4Q14CM0 1322 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 SHPRHQ149N8 1683 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 IRF6O14896 467 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 NOL4O94818 638 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 CD48P09326 243 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 GOT1P17174 413 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 UBA1P22314 1058 aaKnown RBP5.12□□□□□ -1.59
LTN1-202ENST00000389194 PTPN4P29074 926 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 RPL22P35268 128 aaKnown RBP5.12□□□□□ -1.59
LTN1-202ENST00000389194 TUBP50607 506 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 CTBP1Q13363 440 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 UGP2Q16851 508 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 ACBD5Q5T8D3 534 aaPredicted RBP5.12□□□□□ -1.59
LTN1-202ENST00000389194 DEPDC1Q5TB30 811 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 BNC2Q6ZN30 1099 aaPredicted RBP5.12□□□□□ -1.59
LTN1-202ENST00000389194 KCNMB4Q86W47 210 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 WDR49Q8IV35 697 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 LPCAT1Q8NF37 534 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 GDPD5Q8WTR4 605 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 HTR3CQ8WXA8 447 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 LENG1Q96BZ8 264 aaPredicted RBP5.12□□□□□ -1.59
LTN1-202ENST00000389194 SH3GL3Q99963 347 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 FAM96AQ9H5X1 160 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 TCF7L2Q9NQB0 619 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 CIDEBQ9UHD4 219 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 SH3BP1Q9Y3L3 701 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 CASZ1Q86V15 1759 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 A0A0A6YYK5 440 aaPredicted RBP5.12□□□□□ -1.59
LTN1-202ENST00000389194 MYO1DO94832 1006 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 ALBP02768 609 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 HNRNPLP14866 589 aaKnown RBP eCLIP5.12□□□□□ -1.59
LTN1-202ENST00000389194 KDELR1P24390 212 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 BCAT1P54687 386 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 MAPRE2Q15555 327 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 CCDC157Q569K6 752 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 HORMAD1Q86X24 394 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 STKLD1Q8NE28 680 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 DDI1Q8WTU0 396 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 ULBP1Q9BZM6 244 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 PCDH9Q9HC56 1237 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 VPS45Q9NRW7 570 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 ACOT9Q9Y305 439 aa5.12□□□□□ -1.59
LTN1-202ENST00000389194 DLG5Q8TDM6 1919 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 NT5C1B-RDH14C9J2C7 533 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PGK1P00558 417 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 CALB2P22676 271 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ACADSBP45954 432 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 LSM3P62310 102 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 CTXN3Q4LDR2 81 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TTC23LQ6PF05 361 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 METTL7BQ6UX53 244 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 CXCL17Q6UXB2 119 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 DET1Q7L5Y6 550 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 RIBC1Q8N443 379 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 FBXL16Q8N461 479 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TMEM161BQ8NDZ6 487 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TRPC4APQ8TEL6 797 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MED8Q96G25 268 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SLITRK1Q96PX8 696 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 BBS2Q9BXC9 721 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TBC1D10AQ9BXI6 508 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 GRIP2Q9C0E4 1043 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 LRRC40Q9H9A6 602 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 DYRK4Q9NR20 520 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TAGLN3Q9UI15 199 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 BARX2Q9UMQ3 279 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 ATXN2Q99700 1313 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 USP32Q8NFA0 1604 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 M0R3G1 203 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 TBC1D4O60343 1298 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MAN1A2O60476 641 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 CCNT2O60583 730 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 DDX5P17844 614 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 EPHA3P29320 983 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 FMO4P31512 558 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 NR6A1Q15406 480 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 ZBTB49Q6ZSB9 765 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 LDB1Q86U70 411 aaPredicted RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 ARHGAP18Q8N392 663 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 REPS2Q8NFH8 660 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 OR6K2Q8NGY2 324 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PRPF18Q99633 342 aaKnown RBP5.11□□□□□ -1.59
LTN1-202ENST00000389194 CIPCQ9C0C6 399 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 CCDC134Q9H6E4 229 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 DCLRE1BQ9H816 532 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 PALMDQ9NP74 551 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 MID1IP1Q9NPA3 183 aa5.11□□□□□ -1.59
LTN1-202ENST00000389194 SEMA4BQ9NPR2 832 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms