RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 KDM3AQ9Y4C1 1321 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 hCG_1818297A0A087WSY0 165 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 IGKV6D-21A0A0A0MT36 114 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 PODXLO00592 558 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 DNAJC6O75061 913 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 FAM13AO94988 1023 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 GGPS1O95749 300 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 GNAO1P09471 354 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CDK4P11802 303 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SELPP16109 830 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 KLC1Q07866 573 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 NFX1Q12986 1120 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SYCE1Q8N0S2 351 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 PSD4Q8NDX1 1056 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 NDRG1Q92597 394 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 FAM161BQ96MY7 647 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 JPH1Q9HDC5 661 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 ANLNQ9NQW6 1124 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SPATS2LQ9NUQ6 558 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 KLHL14Q9P2G3 628 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CALUO43852 315 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 MYCLP12524 364 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 BMP1P13497 986 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 KRT5P13647 590 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 ITIH2P19823 946 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 OTUD4Q01804 1114 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CENPCQ03188 943 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 DCAF6Q58WW2 860 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 C1QTNF12Q5T7M4 302 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CNKSR3Q6P9H4 555 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 ADGRD1Q6QNK2 874 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 TMEM270Q6UE05 265 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 TRIM74Q86UV6 250 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 TRIM73Q86UV7 250 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 ARID3BQ8IVW6 561 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CCDC60Q8IWA6 550 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CLEC4CQ8WTT0 213 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 VTI1AQ96AJ9 217 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 GPR20Q99678 358 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 ZNF577Q9BSK1 485 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 YIPF2Q9BWQ6 316 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 MUC3BQ9H195 1237 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 WNT8AQ9H1J5 351 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SUDS3Q9H7L9 328 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 PCSK1NQ9UHG2 260 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 KNL1Q8NG31 2342 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 DLGAP1O14490 977 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 ALOX15BO15296 676 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 HBP1O60381 514 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 FBXO21O94952 628 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CLIC3O95833 236 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 PGK1P00558 417 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 KCNA2P16389 499 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SKIV2L2P42285 1042 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CXCR3P49682 368 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CDH15P55291 814 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 RASA2Q15283 850 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 CHST15Q7LFX5 561 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SLC9A9Q8IVB4 645 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 PALM2Q8IXS6 379 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 NAA50Q9GZZ1 169 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SMYD3Q9H7B4 428 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 RNF11Q9Y3C5 154 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 TEX264Q9Y6I9 313 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 USH1CQ9Y6N9 552 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 B2RBV5 119 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 H3BSA7 217 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SBK3P0C264 359 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 KRT15P19012 456 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 MARK3P27448 753 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 EPHA3P29320 983 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SARNPP82979 210 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 LRRC8CQ8TDW0 803 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 PPP4R1Q8TF05 950 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 TMEM143Q96AN5 459 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 FBXL18Q96ME1 805 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SRPK1Q96SB4 655 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 SLX1AQ9BQ83 275 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 TEKT3Q9BXF9 490 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 FTHL17Q9BXU8 183 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 KLHL4Q9C0H6 718 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 ZWILCHQ9H900 591 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 GALNT8Q9NY28 637 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 STX18Q9P2W9 335 aaKnown RBP7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 POLIQ9UNA4 740 aa7.61□□□□□ -1.19
GPCPD1-201ENST00000379019 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 EIF3DO15371 548 aaKnown RBP eCLIP7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 UGT1A6P19224 532 aa7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 ABCD1P33897 745 aa7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 GPC3P51654 580 aa7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 PSMD7P51665 324 aa7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 IFI16Q16666 785 aaKnown RBP7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 TMC7Q7Z402 723 aa7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 RELL1Q8IUW5 271 aa7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 FMNL3Q8IVF7 1028 aa7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 GRK7Q8WTQ7 553 aa7.6□□□□□ -1.19
GPCPD1-201ENST00000379019 ATP6V0A1Q93050 837 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms