RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 OLFM3Q96PB7 478 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 FAM124BQ9H5Z6 455 aaPredicted RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 PCDHGC5Q9Y5F6 944 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 ARIH2O95376 493 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 AMPD1P23109 780 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 ZNF143P52747 638 aaPredicted RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 PRMT2P55345 433 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 LRRC74AQ0VAA2 488 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 STX19Q8N4C7 294 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 LPCAT1Q8NF37 534 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 CCDC90BQ9GZT6 254 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 TKTL2Q9H0I9 626 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 ST3GAL5Q9UNP4 418 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 BAZ2BQ9UIF8 2168 aaKnown RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 CHKAP35790 457 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 COPAP53621 1224 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 MARSP56192 900 aaKnown RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 CNTN1Q12860 1018 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 SCARA3Q6AZY7 606 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 NDEL1Q9GZM8 345 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 POLR1EQ9GZS1 481 aaKnown RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 STK39Q9UEW8 545 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 BTNL10A8MVZ5 291 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 ADH1AP07327 375 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 NFICP08651 508 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 CPA3P15088 417 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 ICAM3P32942 547 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 FLT3LGP49771 235 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 CASP5P51878 434 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 SPDYCQ5MJ68 293 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 PRAMEF19Q5SWL8 479 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 CES5AQ6NT32 575 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 FIBCD1Q8N539 461 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 B3GALNT2Q8NCR0 500 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 CELF6Q96J87 481 aaKnown RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 APOL2Q9BQE5 337 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 TMBIM4Q9HC24 238 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 L1RE1Q9UN81 338 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 ASTN2O75129 1339 aaPredicted RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 MYOM1P52179 1685 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 RNF103O00237 685 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 ADRB2P07550 413 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 USP17L7P0C7H9 530 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 CCDC130P13994 396 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 BCL2L1Q07817 233 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 SGCGQ13326 291 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 PARP6Q2NL67 630 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 TREML2Q5T2D2 321 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 PRPF39Q86UA1 669 aaKnown RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 CCDC134Q9H6E4 229 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 TMEM161AQ9NX61 479 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 CTNNAL1Q9UBT7 734 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 DNMT3LQ9UJW3 386 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 KANSL1LA0AUZ9 987 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 TRDMT1O14717 391 aaKnown RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 PYGMP11217 842 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 PTPN3P26045 913 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 SEL1L3Q68CR1 1132 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 LRRC8BQ6P9F7 803 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 KCNT2Q6UVM3 1135 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 TFAP2DQ7Z6R9 452 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 PHF13Q86YI8 300 aaPredicted RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 PANX3Q96QZ0 392 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 PNKPQ96T60 521 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 TUBGCP4Q9UGJ1 667 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 APPL1Q9UKG1 709 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 VAV3Q9UKW4 847 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 TRIM16O95361 564 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 TRUB2O95900 331 aaKnown RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 CYP1A2P05177 515 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 MSH3P20585 1137 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 CNGA3Q16281 694 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 PHKG1Q16816 387 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 LONP2Q86WA8 852 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 IFNEQ86WN2 208 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 STK40Q8N2I9 435 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 FAM162AQ96A26 154 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 MFSD14AQ96MC6 490 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 ECSITQ9BQ95 431 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 KLC4Q9NSK0 619 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 SCHIP1Q9P0W5 487 aaPredicted RBP13.81□□□□□ -0.2
LDB3-202ENST00000361373 NCKAP1Q9Y2A7 1128 aa13.81□□□□□ -0.2
LDB3-202ENST00000361373 PLIN4Q96Q06 1357 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 SYNDIG1LA6NDD5 238 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 AKAP10O43572 662 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 DYRK3O43781 588 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 ENDOD1O94919 500 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 CCDC153Q494R4 210 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 MOB2Q70IA6 237 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 HELQQ8TDG4 1101 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 CSGALNACT1Q8TDX6 532 aa13.8□□□□□ -0.2
LDB3-202ENST00000361373 GPR20Q99678 358 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms