RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ELMO2Q96JJ3 720 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 MRPL45Q9BRJ2 306 aaKnown RBP12.61□□□□□ -0.39
COL20A1-201ENST00000358894 SP110Q9HB58 689 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 ZBBXA8MT70 800 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 PDHXO00330 501 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 TPD52L2O43399 206 aaKnown RBP12.61□□□□□ -0.39
COL20A1-201ENST00000358894 CILPO75339 1184 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 TMEM63AO94886 807 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 ERVK-10P10266 1014 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 GOT1P17174 413 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 ICAM3P32942 547 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 B3GNT9Q6UX72 402 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 TSHZ1Q6ZSZ6 1077 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 STK32AQ8WU08 396 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 CMTM5Q96DZ9 223 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 SPON2Q9BUD6 331 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 LHX5Q9H2C1 402 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 RNPEPL1Q9HAU8 725 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 LGALS13Q9UHV8 139 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 ZNF280AP59817 542 aaPredicted RBP12.6□□□□□ -0.39
COL20A1-201ENST00000358894 SNX30Q5VWJ9 437 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 C6orf89Q6UWU4 347 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 SLCO2A1Q92959 643 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 C18orf25Q96B23 403 aaPredicted RBP12.6□□□□□ -0.39
COL20A1-201ENST00000358894 TEPSINQ96N21 525 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 LRRC40Q9H9A6 602 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 PCDH18Q9HCL0 1135 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
COL20A1-201ENST00000358894 CDY2AQ9Y6F7 541 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 CDY1Q9Y6F8 540 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 CASTOR2A6NHX0 329 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
COL20A1-201ENST00000358894 CPA3P15088 417 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 SERPINB5P36952 375 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 MGAT5Q09328 741 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 NOMO1Q15155 1222 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 PDZD8Q8NEN9 1154 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 SCG3Q8WXD2 468 aaKnown RBP12.6□□□□□ -0.39
COL20A1-201ENST00000358894 PARK7Q99497 189 aaKnown RBP12.6□□□□□ -0.39
COL20A1-201ENST00000358894 SYT11Q9BT88 431 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 NAT9Q9BTE0 207 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 BTAF1O14981 1849 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 HOXC6P09630 235 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 PSMB4P28070 264 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 PCSK1P29120 753 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 PPHLN1Q8NEY8 458 aaKnown RBP12.6□□□□□ -0.39
COL20A1-201ENST00000358894 SPON1Q9HCB6 807 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 AAASQ9NRG9 546 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 DDX43Q9NXZ2 648 aaKnown RBP12.6□□□□□ -0.39
COL20A1-201ENST00000358894 DCDC2Q9UHG0 476 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 CPA4Q9UI42 421 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 TSC22D4Q9Y3Q8 395 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 MYH4Q9Y623 1939 aa12.6□□□□□ -0.39
COL20A1-201ENST00000358894 TCRBV7S3A2A0A539 114 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 UBA6A0AVT1 1052 aaPredicted RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ARIH2O95376 493 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 EEF1B2P24534 225 aaKnown RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 NUDT2P50583 147 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 MPP2Q14168 576 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 PRAMEF19Q5SWL8 479 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 MAP1SQ66K74 1059 aaPredicted RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 NAPEPLDQ6IQ20 393 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 PMF1Q6P1K2 205 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 PIGZQ86VD9 579 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 LCA5Q86VQ0 697 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 SPATA2LQ8IUW3 424 aaPredicted RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 PLD5Q8N7P1 536 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 NDRG1Q92597 394 aaKnown RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 DDX50Q9BQ39 737 aaKnown RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 MINDY3Q9H8M7 445 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 GOLGA2P5Q9HBQ8 144 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 TAGLN3Q9UI15 199 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 VANGL2Q9ULK5 521 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ARHGEF37A1IGU5 675 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 EPHX2P34913 555 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ASPAP45381 313 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 MPP3Q13368 585 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 APLFQ8IW19 511 aaPredicted RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ICA1LQ8NDH6 482 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 INPP5DQ92835 1189 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 IFT43Q96FT9 208 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 KLHL33A6NCF5 533 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ASMTLO95671 621 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 SPRED3Q2MJR0 410 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ALYREFQ86V81 257 aaKnown RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 NXF3Q9H4D5 531 aaKnown RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 PRDM12Q9H4Q4 367 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ARHGEF38Q9NXL2 777 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 IL1RAPL1Q9NZN1 696 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 TUBGCP4Q9UGJ1 667 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 RABGEF1Q9UJ41 708 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 NR2E3Q9Y5X4 410 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 PRPF4O43172 522 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 SLC1A6P48664 564 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms