RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 SEC23AQ15436 765 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 AGPAT5Q9NUQ2 364 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 KLHL28Q9NXS3 571 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 ATRNO75882 1429 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 XRN1Q8IZH2 1706 aaKnown RBP11.56□□□□□ -0.56
FN1-204ENST00000356005 C16orf96A6NNT2 1141 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 NOS2P35228 1153 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 PAGE2BQ5JRK9 111 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 PSRC1Q6PGN9 363 aaPredicted RBP11.56□□□□□ -0.56
FN1-204ENST00000356005 ILDR2Q71H61 639 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
FN1-204ENST00000356005 SLCO1B7G3V0H7 640 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 FARP2O94887 1054 aaPredicted RBP11.56□□□□□ -0.56
FN1-204ENST00000356005 ENDOD1O94919 500 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 CXCR2P25025 360 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 TM4SF1P30408 202 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 CDH8P55286 799 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 OR8D1Q8WZ84 308 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 PPP1R36Q96LQ0 422 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 TRIM4Q9C037 500 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 HPS5Q9UPZ3 1129 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 MTO1Q9Y2Z2 717 aaKnown RBP11.56□□□□□ -0.56
FN1-204ENST00000356005 DERAQ9Y315 318 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 HOXB8P17481 243 aaPredicted RBP11.56□□□□□ -0.56
FN1-204ENST00000356005 PRAMEF19Q5SWL8 479 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 CLEC4FQ8N1N0 589 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 ZFYVE19Q96K21 471 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 KCNK16Q96T55 309 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 ABCG4Q9H172 646 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 SLC27A6Q9Y2P4 619 aa11.56□□□□□ -0.56
FN1-204ENST00000356005 FOXN3O00409 490 aaPredicted RBP11.55□□□□□ -0.56
FN1-204ENST00000356005 LTFP02788 710 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 HJURPQ8NCD3 748 aaPredicted RBP11.55□□□□□ -0.56
FN1-204ENST00000356005 HELQQ8TDG4 1101 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 ZBTB14O43829 449 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 TRIP4Q15650 581 aaPredicted RBP11.55□□□□□ -0.56
FN1-204ENST00000356005 SMAD1Q15797 465 aaKnown RBP11.55□□□□□ -0.56
FN1-204ENST00000356005 INSCQ1MX18 579 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 VMP1Q96GC9 406 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 CHP1Q99653 195 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 ELOVL6Q9H5J4 265 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 TAS2R13Q9NYV9 303 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 TDRKHQ9Y2W6 561 aaKnown RBP11.55□□□□□ -0.56
FN1-204ENST00000356005 PIK3C2AO00443 1686 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 GOLGA8RI6L899 631 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 GLRA3O75311 464 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 DNTTP04053 509 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 PTPN1P18031 435 aaKnown RBP11.55□□□□□ -0.56
FN1-204ENST00000356005 CUL3Q13618 768 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 CYP20A1Q6UW02 462 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 FAM131BQ86XD5 332 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 ERP44Q9BS26 406 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 CAPN10Q9HC96 672 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 DUOX1Q9NRD9 1551 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 STAU1O95793 577 aaKnown RBP11.55□□□□□ -0.56
FN1-204ENST00000356005 PRKAA2P54646 552 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 STX5Q13190 355 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 TRIM69Q86WT6 500 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 RERGQ96A58 199 aaPredicted RBP11.55□□□□□ -0.56
FN1-204ENST00000356005 FOXN1O15353 648 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 MMP3P08254 477 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 RXRGP48443 463 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 CNGA3Q16281 694 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 ICE2Q659A1 982 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 LRIG3Q6UXM1 1119 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 SV2AQ7L0J3 742 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 CDK20Q8IZL9 346 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 RFWD2Q8NHY2 731 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 NAV1Q8NEY1 1877 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 KRT6AP02538 564 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 KRT6BP04259 564 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 KRT6CP48668 564 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 PPP2R2DQ66LE6 453 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 ZNF248Q8NDW4 579 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 EDEM1Q92611 657 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 TTPALQ9BTX7 342 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 MIR1-1HGQ9H1L0 117 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 SOHLH2Q9NX45 425 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 TMCC3Q9ULS5 477 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 ST3GAL5Q9UNP4 418 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 TNFSF13BQ9Y275 285 aa11.55□□□□□ -0.56
FN1-204ENST00000356005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
FN1-204ENST00000356005 LOXHD1Q8IVV2 1947 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 RASSF9O75901 435 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 MMP13P45452 471 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 MARSP56192 900 aaKnown RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 GCNT1Q02742 428 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 DUSP28Q4G0W2 176 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 RUVBL2Q9Y230 463 aaKnown RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 C2CD2Q9Y426 696 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 PCDHGA4Q9Y5G9 962 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 ENO2P09104 434 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 PLPP4Q5VZY2 271 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 TFAP2DQ7Z6R9 452 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SLC47A2Q86VL8 602 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 ABRAQ8N0Z2 381 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 CTNNAL1Q9UBT7 734 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 TIMM13Q9Y5L4 95 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 SPATA31C2B4DYI2 1134 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 F8VZ95 297 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms