RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PTPN3P26045 913 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 ADCYAP1R1P41586 468 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 CNTN2Q02246 1040 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 GPC2Q8N158 579 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 PHF21BQ96EK2 531 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.47■□□□□ 0.55
COL18A1-202ENST00000355480 NRXN1Q9ULB1 1477 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 SLITRK3O94933 977 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 IGSF6O95976 241 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 PRLRP16471 622 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 BGNP21810 368 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 SCUBE3Q8IX30 993 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 TBCBQ99426 244 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 USP20Q9Y2K6 914 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 TMEM150BA6NC51 233 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 MT-CO1P00395 513 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 ERVK-9P63128 1117 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 KAZALD1Q96I82 304 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 PCDH9Q9HC56 1237 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 NFASCO94856 1347 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 SALL1Q9NSC2 1324 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 ZNF7P17097 686 aaPredicted RBP18.46■□□□□ 0.55
COL18A1-202ENST00000355480 ARHGEF19Q8IW93 802 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 CSGALNACT1Q8TDX6 532 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 RNF208Q9H0X6 261 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 SH3BP4Q9P0V3 963 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 SLC24A2Q9UI40 661 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 TMEM114B3SHH9 223 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 PIK3CDO00329 1044 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 MPOP05164 745 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 AMPD1P23109 780 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 RCN1Q15293 331 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 FNDC3BQ53EP0 1204 aaKnown RBP18.46■□□□□ 0.55
COL18A1-202ENST00000355480 HOMEZQ8IX15 550 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 POLG2Q9UHN1 485 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 RGS5O15539 181 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 DSG1Q02413 1049 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 KCNMA1Q12791 1236 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 PREPLQ4J6C6 727 aaPredicted RBP18.46■□□□□ 0.55
COL18A1-202ENST00000355480 IRAK1BP1Q5VVH5 260 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 SPG21Q9NZD8 308 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 ARHGAP20Q9P2F6 1191 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 PPP2R1BP30154 601 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 CDH8P55286 799 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 OTOP1Q7RTM1 612 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 PDGFDQ9GZP0 370 aaPredicted RBP18.46■□□□□ 0.55
COL18A1-202ENST00000355480 PIF1Q9H611 641 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 SLC40A1Q9NP59 571 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 IL17RBQ9NRM6 502 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 FBXL21Q9UKT6 434 aa18.46■□□□□ 0.55
COL18A1-202ENST00000355480 ABCB1P08183 1280 aaPredicted RBP18.45■□□□□ 0.54
COL18A1-202ENST00000355480 GTF2E2P29084 291 aaKnown RBP18.45■□□□□ 0.54
COL18A1-202ENST00000355480 TUFMP49411 452 aaKnown RBP18.45■□□□□ 0.54
COL18A1-202ENST00000355480 PRKAA1Q13131 559 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DSG4Q86SJ6 1040 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DEFB106AQ8N104 65 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 HNRNPLLQ8WVV9 542 aaKnown RBP18.45■□□□□ 0.54
COL18A1-202ENST00000355480 HTR3CQ8WXA8 447 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 TMEM120AQ9BXJ8 343 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 MRPL42Q9Y6G3 142 aaKnown RBP18.45■□□□□ 0.54
COL18A1-202ENST00000355480 AK9Q5TCS8 1911 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 RAD51BO15315 384 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 FAM180AQ6UWF9 173 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 ZPBP2Q6X784 338 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 NYAP1Q6ZVC0 841 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 GLT6D1Q7Z4J2 308 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 RGS18Q9NS28 235 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 NCKAP1Q9Y2A7 1128 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 E9PCH4 1651 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 UBDO15205 165 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 BEX3Q00994 111 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 PDPK2PQ6A1A2 396 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DOK6Q6PKX4 331 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 NIPA1Q7RTP0 329 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 KCNMB4Q86W47 210 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 SLC5A5Q92911 643 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 SYBUQ9NX95 663 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 KLHL28Q9NXS3 571 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 VPS51Q9UID3 782 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 A0A1B0GW55 424 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 WDR27A2RRH5 827 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 FYNP06241 537 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DUX4L2P0CJ85 424 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DUX4L3P0CJ86 424 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DUX4L4P0CJ87 422 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DUX4L5P0CJ88 424 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DUX4L6P0CJ89 424 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DUX4L7P0CJ90 424 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 RANBP1P43487 201 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 PPATQ06203 517 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 AGKQ53H12 422 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 NLNQ9BYT8 704 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DPY30Q9C005 99 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 PIH1D1Q9NWS0 290 aaKnown RBP18.45■□□□□ 0.54
COL18A1-202ENST00000355480 DUX4Q9UBX2 424 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 OR56A5P0C7T3 313 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 CCDC130P13994 396 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 TRAF2Q12933 501 aa18.45■□□□□ 0.54
COL18A1-202ENST00000355480 SCUBE1Q8IWY4 988 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms