RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 COPG2Q9UBF2 871 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 RIC1Q4ADV7 1423 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 MYH15Q9Y2K3 1946 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 TPP1O14773 563 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 TSC22D2O75157 780 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 PIGNO95427 931 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 CAPN1P07384 714 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 TGM2P21980 687 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 NAGLUP54802 743 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 PLCL1Q15111 1095 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 LDHDQ86WU2 507 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 BPIFB6Q8NFQ5 453 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 NOL11Q9H8H0 719 aaKnown RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 CLK4Q9HAZ1 481 aaKnown RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 RUVBL2Q9Y230 463 aaKnown RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 ANGPTL3Q9Y5C1 460 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 MYO1GB0I1T2 1018 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 SIN3BO75182 1162 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 ARPP19P56211 112 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 ZC3H12AQ5D1E8 599 aaKnown RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 FNBP1LQ5T0N5 605 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 UNC45BQ8IWX7 931 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 HTRA1Q92743 480 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 FAM136AQ96C01 138 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 SERAC1Q96JX3 654 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 PRMT6Q96LA8 375 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 REXO4Q9GZR2 422 aaKnown RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 C6orf62Q9GZU0 229 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 HMG20AQ9NP66 347 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 TBC1D22BQ9NU19 505 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 TUBA8Q9NY65 449 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 KIF17Q9P2E2 1029 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 PSMD12O00232 456 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 TRIM13O60858 407 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 TIPRLO75663 272 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 SUPT7LO94864 414 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 WDR47O94967 919 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 LCP1P13796 627 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 GPC3P51654 580 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 JAM2P57087 298 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 POLD3Q15054 466 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 SYTL1Q8IYJ3 562 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 KREMEN1Q96MU8 473 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 SIX2Q9NPC8 291 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 PNPLA3Q9NST1 481 aa13.59□□□□□ -0.23
COL2A1-201ENST00000337299 GPC6Q9Y625 555 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-201ENST00000337299 SPTLC1O15269 473 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 ZC3H11AO75152 810 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL2A1-201ENST00000337299 ALOX12P18054 663 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 ATP6V1B2P21281 511 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 RBL1P28749 1068 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 ADORA2BP29275 332 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 PLK1P53350 603 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 DENND1BQ6P3S1 775 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 STK32CQ86UX6 486 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 GLIS1Q8NBF1 620 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 PSMA8Q8TAA3 256 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 NRG4Q8WWG1 115 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 NPAS2Q99743 824 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 FSD1LQ9BXM9 530 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 KCNH7Q9NS40 1196 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 USP18Q9UMW8 372 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 MRASO14807 208 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 USP12O75317 370 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 NPTX2P47972 431 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 JAK3P52333 1124 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 MAMLD1Q13495 774 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 FNIP1Q8TF40 1166 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 PPME1Q9Y570 386 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 TNS2Q63HR2 1409 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 A0A096LPK6 155 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 A0A0J9YVX5 310 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 ADRB2P07550 413 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 PDGFRBP09619 1106 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 CCNA2P20248 432 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 S100A1P23297 94 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 ABCE1P61221 599 aaKnown RBP13.58□□□□□ -0.24
COL2A1-201ENST00000337299 XIAPP98170 497 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 C10orf107Q8IVU9 208 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 HELQQ8TDG4 1101 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 SHC3Q92529 594 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 C1orf50Q9BV19 199 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
COL2A1-201ENST00000337299 KCND2Q9NZV8 630 aa13.58□□□□□ -0.24
COL2A1-201ENST00000337299 FAM149AA5PLN7 773 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 SDR42E2A6NKP2 422 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 ADAM17P78536 824 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 GNA12Q03113 381 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 ITGA7Q13683 1181 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 FAM83EQ2M2I3 478 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 ELMO1Q92556 727 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 CXorf21Q9HAI6 301 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-201ENST00000337299 WDR37Q9Y2I8 494 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 ERVK-10P10266 1014 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 KCNA2P16389 499 aa13.57□□□□□ -0.24
COL2A1-201ENST00000337299 DPEP1P16444 411 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms