RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TARSP26639 723 aaKnown RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 NOS2P35228 1153 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 AQP5P55064 265 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 KCNMA1Q12791 1236 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 FBXW10Q5XX13 1052 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 WDR59Q6PJI9 974 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 C11orf96Q7Z7L8 435 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 GALNT4Q8N4A0 578 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 PHF21AQ96BD5 680 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 SHCBP1LQ9BZQ2 653 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 IGSF6O95976 241 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 YBX3P16989 372 aaKnown RBP eCLIP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 ATXN3P54252 364 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 FKBP1BP68106 108 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 STARD3Q14849 445 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 FOXR2Q6PJQ5 311 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 BNC2Q6ZN30 1099 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-201ENST00000254667 HSFY1Q96LI6 401 aa19.44■□□□□ 0.7
PTPRE-201ENST00000254667 ATRNO75882 1429 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 KCNA3P22001 575 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 CSTF3Q12996 717 aaKnown RBP19.43■□□□□ 0.7
PTPRE-201ENST00000254667 POU6F1Q14863 301 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 PABPC1LQ4VXU2 614 aaKnown RBP19.43■□□□□ 0.7
PTPRE-201ENST00000254667 SLC39A12Q504Y0 691 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 KCNMB4Q86W47 210 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 PLD3Q8IV08 490 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 LENG9Q96B70 501 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 TSPAN18Q96SJ8 248 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 CYP4F12Q9HCS2 524 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 SLC40A1Q9NP59 571 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 UBP1Q9NZI7 540 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 E5RJQ4 531 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 GALNTL6Q49A17 601 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 TJAP1Q5JTD0 557 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 LRRC38Q5VT99 294 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 KAT2BQ92831 832 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 SEMA4AQ9H3S1 761 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 ELOVL6Q9H5J4 265 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 UTP6Q9NYH9 597 aaKnown RBP19.43■□□□□ 0.7
PTPRE-201ENST00000254667 FAM153AQ9UHL3 310 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 POLG2Q9UHN1 485 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 TAGLN3Q9UI15 199 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 PRR23AA6NEV1 266 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 RNF103O00237 685 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 FGF10O15520 208 aaPredicted RBP19.43■□□□□ 0.7
PTPRE-201ENST00000254667 SERPINB5P36952 375 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 PEX5P50542 639 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 SCARA3Q6AZY7 606 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 ADCK1Q86TW2 530 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 TMEM161BQ8NDZ6 487 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 ERI2A8K979 691 aaKnown RBP19.43■□□□□ 0.7
PTPRE-201ENST00000254667 IRF6O14896 467 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 AP5Z1O43299 807 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 IFNA14P01570 189 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 PRKAA1Q13131 559 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 PHKG1Q16816 387 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 TDRD5Q8NAT2 981 aaKnown RBP19.43■□□□□ 0.7
PTPRE-201ENST00000254667 CAMKK2Q96RR4 588 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 GAD1Q99259 594 aa19.43■□□□□ 0.7
PTPRE-201ENST00000254667 MGAT4DA6NG13 374 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 SIGLEC16A6NMB1 481 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 IFRD1O00458 451 aaPredicted RBP19.42■□□□□ 0.7
PTPRE-201ENST00000254667 KRT6AP02538 564 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 KRT6BP04259 564 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 PTPN1P18031 435 aaKnown RBP19.42■□□□□ 0.7
PTPRE-201ENST00000254667 KRT6CP48668 564 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 GRIK5Q16478 980 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 EPS8L1Q8TE68 723 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 WNT8BQ93098 351 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 C18orf25Q96B23 403 aaPredicted RBP19.42■□□□□ 0.7
PTPRE-201ENST00000254667 SIKE1Q9BRV8 207 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 NMRAL1Q9HBL8 299 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 KRCC1Q9NPI7 259 aaPredicted RBP19.42■□□□□ 0.7
PTPRE-201ENST00000254667 ACADSP16219 412 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 MSH3P20585 1137 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 CYP2A7P20853 494 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 PLOD1Q02809 727 aaPredicted RBP19.42■□□□□ 0.7
PTPRE-201ENST00000254667 CHRNB3Q05901 458 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 PPP3CAQ08209 521 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 TFAP2DQ7Z6R9 452 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 EIF1ADQ8N9N8 165 aaKnown RBP19.42■□□□□ 0.7
PTPRE-201ENST00000254667 VPS50Q96JG6 964 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 TBL1YQ9BQ87 522 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 ATXN3LQ9H3M9 355 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 PCDHGC5Q9Y5F6 944 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 SPATA31C2B4DYI2 1134 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 TRDMT1O14717 391 aaKnown RBP19.42■□□□□ 0.7
PTPRE-201ENST00000254667 GPC1P35052 558 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 ANKZF1Q9H8Y5 726 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 VTI1BQ9UEU0 232 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 S100A5P33763 92 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 RUNX1T1Q06455 604 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 IKBKEQ14164 716 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 DSG4Q86SJ6 1040 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 PHACTR4Q8IZ21 702 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 LGI2Q8N0V4 545 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 SEPT3Q9UH03 358 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 SFMBT1Q9UHJ3 866 aa19.42■□□□□ 0.7
PTPRE-201ENST00000254667 DISP2A7MBM2 1401 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 KRT8P05787 483 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms