RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 STX18Q9P2W9 335 aaKnown RBP13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 ZNF212Q9UDV6 495 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 CRLS1Q9UJA2 301 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 TMA7Q9Y2S6 64 aaKnown RBP13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 C15orf41Q9Y2V0 281 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 WDR27A2RRH5 827 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 C2orf81A6NN90 581 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 SOAT2O75908 522 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 SEC24DO94855 1032 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 GP5P40197 560 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 CLK2P49760 499 aaKnown RBP13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 DRG2P55039 364 aaKnown RBP13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 POU4F1Q01851 419 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 FAAP100Q0VG06 881 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 RCN1Q15293 331 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 SYTL3Q4VX76 610 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 OMA1Q96E52 524 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 TRMT6Q9UJA5 497 aaKnown RBP13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 SGO1Q5FBB7 561 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 USP50Q70EL3 339 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 GALNT4Q8N4A0 578 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 TTC30BQ8N4P2 665 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 FLCNQ8NFG4 579 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 SMARCD1Q96GM5 515 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 PCDHB18PQ96TA0 734 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 TMEM165Q9HC07 324 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 RIC8BQ9NVN3 520 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 BTBD7Q9P203 1132 aa13.05□□□□□ -0.32
PCDHGA12-201ENST00000252085 CFAP99D6REC4 459 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 TULP2O00295 520 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 ASS1P00966 412 aaKnown RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 FLOT2Q14254 428 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 FSCN1Q16658 493 aaKnown RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 TMC5Q6UXY8 1006 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 TTC30AQ86WT1 665 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 EGFL6Q8IUX8 553 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 ULBP1Q9BZM6 244 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 IL1RAPL1Q9NZN1 696 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 DRG1Q9Y295 367 aaKnown RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 IGLV3-22A0A075B6J6 115 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 OPLAHO14841 1288 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 LIASO43766 372 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 SERPINB5P36952 375 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 RAB27AP51159 221 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 CDH17Q12864 832 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 STX5Q13190 355 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 N4BP2L1Q5TBK1 243 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 CES3Q6UWW8 571 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 ABHD15Q6UXT9 468 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 EFL1Q7Z2Z2 1120 aaKnown RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 UNC93AQ86WB7 457 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 APBB2Q92870 758 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 SENP8Q96LD8 212 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 SRPK1Q96SB4 655 aaKnown RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 GPBP1L1Q9HC44 474 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 KIF17Q9P2E2 1029 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 FSCN2O14926 492 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 ATP6V1G2O95670 118 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 ZCCHC18P0CG32 403 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 CALB2P22676 271 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 CSE1LP55060 971 aaKnown RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 OXCT1P55809 520 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 KCNK10P57789 538 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 AUHQ13825 339 aaKnown RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 SEL1L3Q68CR1 1132 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 TUBGCP3Q96CW5 907 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 CCDC126Q96EE4 140 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 APOPT1Q96IL0 206 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 DMAP1Q9NPF5 467 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 STARD7Q9NQZ5 370 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 TUBA8Q9NY65 449 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 ENDOD1O94919 500 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 ADRA1DP25100 572 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 ZNF143P52747 638 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 MARC1Q5VT66 337 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 TFAP2DQ7Z6R9 452 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 TMCO5AQ8N6Q1 288 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 FOPNLQ96NB1 174 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 TRPM5Q9NZQ8 1165 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 SEPT3Q9UH03 358 aa13.04□□□□□ -0.32
PCDHGA12-201ENST00000252085 PLIN4Q96Q06 1357 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 MANSC4A6NHS7 340 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 TRIM16O95361 564 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 THRAP10827 490 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 TAS2R40P59535 323 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 TBL3Q12788 808 aaKnown RBP13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 ITGA9Q13797 1035 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 CSHL1Q14406 222 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 NPNTQ6UXI9 565 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 PAWRQ96IZ0 340 aaKnown RBP13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 TTYH3Q9C0H2 523 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 E9PBE3 544 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 KLHL41O60662 606 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 LTFP02788 710 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 ILDR2Q71H61 639 aa13.03□□□□□ -0.32
PCDHGA12-201ENST00000252085 MSL3Q8N5Y2 521 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms