RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 RIBC1Q8N443 379 aaPredicted RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 HDDC3Q8N4P3 179 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 C17orf80Q9BSJ5 609 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 NXF3Q9H4D5 531 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 A1CFQ9NQ94 594 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 STOML1Q9UBI4 398 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 HEY2Q9UBP5 337 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 LIMD1Q9UGP4 676 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 MRPS23Q9Y3D9 190 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 C2orf81A6NN90 581 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 ERVK-10P10266 1014 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 ITGB5P18084 799 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 LHX1P48742 406 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SPRYD7Q5W111 196 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 GDF6Q6KF10 455 aaPredicted RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 KLK6Q92876 244 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 MAGEB18Q96M61 343 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 COLEC11Q9BWP8 271 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TRIM54Q9BYV2 358 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 VPS28Q9UK41 221 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 VANGL2Q9ULK5 521 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 HEMK1Q9Y5R4 338 aaPredicted RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SLC12A8A0AV02 714 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 PARNO95453 639 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SLC6A3Q01959 620 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 GCNT1Q02742 428 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TCHHL1Q5QJ38 904 aaPredicted RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 PIGKQ92643 395 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TMPRSS4Q9NRS4 437 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 COL20A1Q9P218 1284 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CPSF4O95639 269 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 BDNFP23560 247 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SCNN1BP51168 640 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 RPL7AP62424 266 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CDH18Q13634 790 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 ARHGEF7Q14155 803 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CREG2Q8IUH2 290 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 ATP6V0D2Q8N8Y2 350 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 AENQ8WTP8 325 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CENPKQ9BS16 269 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 RUBCNLQ9H714 662 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TRMT6Q9UJA5 497 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 RBAK-RBAKDNI3L0D1 243 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SNX17Q15036 470 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CCNG2Q16589 344 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 IRF2BP2Q7Z5L9 587 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 LRCH3Q96II8 777 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 HAUS8Q9BT25 410 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 B3GNT5Q9BYG0 378 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 FAM129AQ9BZQ8 928 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 VPS33BQ9H267 617 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 RNPEPQ9H4A4 650 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 NOD2Q9HC29 1040 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SLC38A7Q9NVC3 462 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SLC25A13Q9UJS0 675 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 DNAJC16Q9Y2G8 782 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 ROBO3Q96MS0 1386 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 ASGR1P07306 291 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 PECAM1P16284 738 aaPredicted RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 KDELR1P24390 212 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 STIP1P31948 543 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SCTRP47872 440 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 PSEN2P49810 448 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TTC23LQ6PF05 361 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CLEC4FQ8N1N0 589 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TNFRSF25Q93038 417 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 DONSONQ9NYP3 566 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CPED1A4D0V7 1026 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 C2orf71A6NGG8 1288 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 UBOX5O94941 541 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 LSM8O95777 96 aaKnown RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 MIPP30301 263 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SERPINB9P50453 376 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 PDK2Q15119 407 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CNGA3Q16281 694 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 ZFYVE1Q9HBF4 777 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 ZDHHC4Q9NPG8 344 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CDYLQ9Y232 598 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SNX5Q9Y5X3 404 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SMNDC1O75940 238 aaKnown RBP eCLIP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 JCHAINP01591 159 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 LGALS2P05162 132 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SCNN1GP51170 649 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TAS2R40P59535 323 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 PPIL2Q13356 520 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 GDPD5Q8WTR4 605 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 DDI1Q8WTU0 396 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 FAM122AQ96E09 287 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 GZMAP12544 262 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 CD52P31358 61 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 FMO1Q01740 532 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 PPIGQ13427 754 aaKnown RBP eCLIP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 GALNT3Q14435 633 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TRIP10Q15642 601 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 TBCCQ15814 346 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 C2orf27AQ580R0 203 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 EEF1DP3Q658K8 133 aa4.83□□□□□ -1.64
RAP1B-201ENST00000250559 MAFAQ8NHW3 353 aaPredicted RBP4.83□□□□□ -1.64
RAP1B-201ENST00000250559 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms