RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 CRTAMO95727 393 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 F9P00740 461 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 TPBGLP0DKB5 382 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 TCF3P15923 654 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 AKAP5P24588 427 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 CD302Q8IX05 232 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 ZNF614Q8N883 585 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 SLC35C1Q96A29 364 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 ATXN3LQ9H3M9 355 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 ZFYVE28Q9HCC9 887 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 CYLDQ9NQC7 956 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 MGAT4DA6NG13 374 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 LRG1P02750 347 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 PKNOX1P55347 436 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 ALFQ53S48 1182 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 STK32AQ8WU08 396 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 HTR3CQ8WXA8 447 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 OSMRQ99650 979 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 MID1IP1Q9NPA3 183 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 BLOC1S4Q9NUP1 217 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 GTF2A1LQ9UNN4 478 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 BANF1O75531 89 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 SNUPNO95149 360 aaKnown RBP13.7□□□□□ -0.22
NEK4-201ENST00000233027 SCNN1BP51168 640 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 VPS72Q15906 364 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 MEA1Q16626 185 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 ERAP2Q6P179 960 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 NPNTQ6UXI9 565 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 TMEM26Q6ZUK4 368 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
NEK4-201ENST00000233027 LPCAT1Q8NF37 534 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 UTP15Q8TED0 518 aaKnown RBP13.7□□□□□ -0.22
NEK4-201ENST00000233027 CDRT15Q96T59 188 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 DDX43Q9NXZ2 648 aaKnown RBP13.7□□□□□ -0.22
NEK4-201ENST00000233027 CCDC167Q9P0B6 97 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 SNX8Q9Y5X2 465 aa13.7□□□□□ -0.22
NEK4-201ENST00000233027 GAKO14976 1311 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 A0A096LPK6 155 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 CD151P48509 253 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 PLK1P53350 603 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 C16orf72Q14CZ0 275 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 TADA1Q96BN2 335 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 ZBTB45Q96K62 511 aaPredicted RBP13.69□□□□□ -0.22
NEK4-201ENST00000233027 CPNE1Q99829 537 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 PADI4Q9UM07 663 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
NEK4-201ENST00000233027 ANKRD63C9JTQ0 380 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 TSPAN3O60637 253 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 PROCP04070 461 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 ABCG1P45844 678 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 SKIV2LQ15477 1246 aaKnown RBP13.69□□□□□ -0.22
NEK4-201ENST00000233027 TPD52L3Q96J77 140 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 TRAPPC9Q96Q05 1148 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 OSBPL10Q9BXB5 764 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 PAIP1Q9H074 479 aaKnown RBP13.69□□□□□ -0.22
NEK4-201ENST00000233027 ACP6Q9NPH0 428 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 TMX2Q9Y320 296 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 EML1O00423 815 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 ZNF862O60290 1169 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 HMGCRP04035 888 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 RHOCP08134 193 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 VIL1P09327 827 aaKnown RBP13.69□□□□□ -0.22
NEK4-201ENST00000233027 PSMD7P51665 324 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 BACE1P56817 501 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 ARMCX4Q5H9R4 360 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 ILDR2Q71H61 639 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 OTOP1Q7RTM1 612 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 TRPC4APQ8TEL6 797 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 RMND5BQ96G75 393 aaPredicted RBP13.69□□□□□ -0.22
NEK4-201ENST00000233027 C6orf62Q9GZU0 229 aaPredicted RBP13.69□□□□□ -0.22
NEK4-201ENST00000233027 TBC1D13Q9NVG8 400 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
NEK4-201ENST00000233027 OPLAHO14841 1288 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 CETPP11597 493 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 GP5P40197 560 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 PRKAA1Q13131 559 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 SPANXN3Q5MJ09 141 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 FNDC5Q8NAU1 212 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 STMN3Q9NZ72 180 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 VPS28Q9UK41 221 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 CCDC154A6NI56 674 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 TPP1O14773 563 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 FCGR1AP12314 374 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 CCDC130P13994 396 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 RARRES1P49788 294 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 RHOAP61586 193 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 NECAB2Q7Z6G3 386 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 FAM228AQ86W67 206 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 FUKQ8N0W3 1084 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 MED8Q96G25 268 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 SYBUQ9NX95 663 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 SIK3Q9Y2K2 1263 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 TECPR2O15040 1411 aa13.69□□□□□ -0.22
NEK4-201ENST00000233027 SALL1Q9NSC2 1324 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 MAP2K7O14733 419 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 HS6ST1O60243 411 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 USP12O75317 370 aa13.68□□□□□ -0.22
NEK4-201ENST00000233027 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms