RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PPFIA2O75334 1257 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 IRAK1P51617 712 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 GBE1Q04446 702 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 FAM72AQ5TYM5 149 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 NCBP2-AS2Q69YL0 99 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 FAM72DQ6L9T8 149 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 B4GALNT4Q76KP1 1039 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 FAM72BQ86X60 149 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CASP10Q92851 521 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 SPATA17Q96L03 361 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CLSTN3Q9BQT9 956 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 NUDT5Q9UKK9 219 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 MFHAS1Q9Y4C4 1052 aa20.38■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ZFXP17010 805 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ATF6P18850 670 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 SKOR1P84550 965 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 DSG1Q02413 1049 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 SLC10A2Q12908 348 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 DNAJC21Q5F1R6 531 aaKnown RBP20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 RSAD2Q8WXG1 361 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ADAM7Q9H2U9 754 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 SFMBT1Q9UHJ3 866 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ATP8A1Q9Y2Q0 1164 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ZBBXA8MT70 800 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 GPS1Q13098 491 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 MTMR3Q13615 1198 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CEP85LQ5SZL2 805 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 IZUMO3Q5VZ72 239 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 LRIG3Q6UXM1 1119 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 FAM71DQ8N9W8 422 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 OR2W6PQ8NHA6 318 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 BADQ92934 168 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CAPS2Q9BXY5 557 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 GMIPQ9P107 970 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 PRKAG2Q9UGJ0 569 aa20.37■□□□□ 0.85
TNFRSF1A-201ENST00000162749 SHROOM3Q8TF72 1996 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 PLXNA4Q9HCM2 1894 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CDH23Q9H251 3354 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 H3BRJ5 948 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 MSI1O43347 362 aaKnown RBP20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 RTN3O95197 1032 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 YWHAQP27348 245 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 GLUD2P49448 558 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 NRLP54845 237 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 DARS2Q6PI48 645 aaKnown RBP20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 SPG21Q9NZD8 308 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ANAPC5Q9UJX4 755 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 DOCK4Q8N1I0 1966 aa20.36■□□□□ 0.85
TNFRSF1A-201ENST00000162749 H7C0C1 242 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 EEF2KO00418 725 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 GJB5O95377 273 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 IVLP07476 585 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 STIP1P31948 543 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ATP5OP48047 213 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 NR2C2P49116 596 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 RPL10AP62906 217 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CAV1Q03135 178 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 DPYSQ14117 519 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 RFX8Q6ZV50 586 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 BBOF1Q8ND07 529 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 TMBIM4Q9HC24 238 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 AAASQ9NRG9 546 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 DTLQ9NZJ0 730 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CHD9Q3L8U1 2897 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 DNALI1O14645 258 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 FPGSQ05932 587 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 TAF10Q12962 218 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 PPIGQ13427 754 aaKnown RBP eCLIP20.35■□□□□ 0.856e-8■■■■□ 21.4
TNFRSF1A-201ENST00000162749 HIBCHQ6NVY1 386 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 DDX53Q86TM3 631 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ARHGAP18Q8N392 663 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ZNF461Q8TAF7 563 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 RNF34Q969K3 372 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 FBXO32Q969P5 355 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ATP6V1G3Q96LB4 118 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 HERC2P3Q9BVR0 1158 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 USP29Q9HBJ7 922 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 OR12D3Q9UGF7 316 aa20.35■□□□□ 0.85
TNFRSF1A-201ENST00000162749 FGBP02675 491 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ZNF844Q08AG5 666 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 EMC10Q5UCC4 262 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 TTC19Q6DKK2 380 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 UBLCP1Q8WVY7 318 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 PRDM16Q9HAZ2 1276 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ARHGEF38Q9NXL2 777 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CXXC1Q9P0U4 656 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 AFF4Q9UHB7 1163 aaKnown RBP20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ANAPC1Q9H1A4 1944 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CARNS1A5YM72 827 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 ABLIM3O94929 683 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CHKAP35790 457 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 MSANTD2Q6P1R3 559 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 GIPC2Q8TF65 315 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 LRRN4Q8WUT4 740 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 OLFM3Q96PB7 478 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 CLIC5Q9NZA1 410 aa20.34■□□□□ 0.85
TNFRSF1A-201ENST00000162749 MYO7AQ13402 2215 aa20.33■□□□□ 0.85
TNFRSF1A-201ENST00000162749 BCLAF3A2AJT9 711 aaKnown RBP20.33■□□□□ 0.85
TNFRSF1A-201ENST00000162749 MFSD11O43934 449 aa20.33■□□□□ 0.85
TNFRSF1A-201ENST00000162749 LINC00271P0C7V0 271 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms