RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gpr25P0C5I1 358 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 YwhagP61982 247 aaKnown RBP26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 SiaeP70665 541 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 PtprjQ64455 1238 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Glra2Q7TNC8 452 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Slc7a4Q8BLQ7 635 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Stx16Q8BVI5 326 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 DrgxQ8BYH0 263 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Spdye4bQ8CDE8 236 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Zcchc14Q8VIG0 956 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Ppa2Q91VM9 330 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Zfp617Q91WM0 559 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Msantd4Q91YU3 345 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 DmgdhQ9DBT9 869 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Pak1ip1Q9DCE5 382 aaKnown RBP26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Plscr2Q9DCW2 307 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Acox2Q9QXD1 681 aa26.62■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Vmn2r59E9PUT5 865 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Gm11239E9Q5Z9 360 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Gm11237F2Z3W5 360 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Gm11238F2Z478 360 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Dpysl2O08553 572 aaKnown RBP26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Cdc6O89033 562 aaKnown RBP26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 AfpP02772 605 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Pgk1P09411 417 aaKnown RBP26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Oas1aP11928 367 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Tsta3P23591 321 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Gm428Q3UTE2 360 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Shroom1Q5SX79 823 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Itga3Q62470 1053 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Nuak1Q641K5 658 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Fra10ac1Q8BP78 315 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Oas1gQ8K469 367 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Traf3ip2Q8N7N6 555 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Pcdha1Q91Y21 948 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Cog2Q921L5 731 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Tdrd12Q9CWU0 1215 aa26.61■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Pate1E9Q658 125 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Btg4O70552 250 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 March5Q3KNM2 278 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Nlrp4fQ66X05 959 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Ccdc154Q6RUT8 657 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Baiap2l2Q80Y61 522 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Amz1Q8BVF9 502 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 GancQ8BVW0 898 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Iffo1Q8BXL9 562 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 4921504E06RikQ8CET2 560 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Lpin1Q91ZP3 924 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Lrp8Q924X6 996 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Chmp2aQ9DB34 222 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Ripk3Q9QZL0 486 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Atg2aQ6P4T0 1914 aa26.6■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Igkv5-45A0A0B4J1J1 115 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Clcn6O35454 870 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Atxn1lP0C7T6 687 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Apobec1P51908 229 aaKnown RBP26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Sycp3P70281 254 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Sec23ipQ6NZC7 998 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Olfr538Q7TRT5 310 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Pdk1Q8BFP9 434 aaKnown RBP26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Glis1Q8K1M4 789 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Sec63Q8VHE0 760 aaKnown RBP26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Abcg3Q99P81 650 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Krt20Q9D312 431 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Map3k6Q9WTR2 1291 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 MycP01108 439 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Rag1P15919 1040 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 NrlP54846 237 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 PhbP67778 272 aaKnown RBP26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Cdkn3Q810P3 211 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Mettl21cQ8BLU2 248 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Spag16Q8K450 639 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 SarafQ8R3Q0 334 aa26.59■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Igkv5-43A0A0B4J1J2 115 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Gm43951A0A0N4SUT6 962 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Ankfn1A0A140LIW7 1083 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Tnfrsf11bO08712 401 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Ercc2O08811 760 aaKnown RBP26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 ShdO88834 343 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Cdo1P60334 200 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 RnaselQ05921 735 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Rad54bQ6PFE3 886 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Olfr867Q7TRF3 331 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 CtbsQ8R242 366 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Dnajc14Q921R4 703 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Gps1Q99LD4 471 aaKnown RBP26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Gemin2Q9CQQ4 269 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Ccdc103Q9D9P2 237 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 1700013H16RikQ9DAC5 291 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Cyp4v2Q9DBW0 525 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Pex11bQ9Z210 259 aa26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Ep400Q8CHI8 3072 aaKnown RBP26.58■■□□□ 1.85
Tpm1-216ENSMUST00000113707 Cyp4a12bA2A974 508 aa26.57■■□□□ 1.84
Tpm1-216ENSMUST00000113707 RxrbP28704 520 aa26.57■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Fmo3P97501 534 aa26.57■■□□□ 1.84
Tpm1-216ENSMUST00000113707 RadilQ69Z89 1099 aa26.57■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Sytl5Q80T23 753 aa26.57■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Ip6k2Q80V72 448 aa26.57■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Hmgcll1Q8JZS7 343 aa26.57■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Fbxo21Q8VDH1 627 aa26.57■■□□□ 1.84
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms