RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Sh3bp1P55194 680 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Usp46P62069 366 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Stmn4P63042 189 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 RelaQ04207 549 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Syne3Q4FZC9 975 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Arhgap30Q640N3 1101 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Krt42Q6IFX2 452 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ccdc117Q6PB51 277 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Trim62Q80V85 475 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Trnau1apQ80VC6 287 aaKnown RBP23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Uba6Q8C7R4 1053 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ifi205aQ8CGE8 404 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Stau2Q8CJ67 570 aaKnown RBP23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pcdhb6Q91XZ4 772 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Rnf135Q9CWS1 417 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Tspan17Q9D7W4 270 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Fut8Q9WTS2 575 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ptgdr2Q9Z2J6 382 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Gm28510A0A087WP28 240 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Vmn2r84D3YWE3 849 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pcsk6F6XJP7 959 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Marcksl1P28667 200 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Neurog2P70447 263 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 DazlQ64368 298 aaKnown RBP23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 PdgfrlQ6PE55 375 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 SgczQ8BX51 311 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Tbc1d14Q8CGA2 694 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Mfsd14bQ8CIA9 507 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pth2rQ91V95 546 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pcdha3Q91Y16 942 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Q922M7 232 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pde2aQ922S4 916 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Syap1Q9D5V6 365 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Smg9Q9DB90 520 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Strn3Q9ERG2 796 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Tk2Q9R088 270 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Cpxm1Q9Z100 722 aa23.47■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Zfp715G3X9T1 886 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Fgf15O35622 218 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ppp3ccP48455 513 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Lipo3Q3UT41 399 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pla2g4dQ50L43 825 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 FsbpQ8BKE5 299 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Apol7cQ8C6E1 369 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ugt3a2Q8JZZ0 523 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Fads1Q920L1 447 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Gemin2Q9CQQ4 269 aa23.46■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Atp8b4A2ANX3 1194 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Apol7bB1AQP7 369 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Apol7eQ3UZ24 369 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Txndc8Q69AB2 127 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Kif11Q6P9P6 1052 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Fbxl13Q8CDU4 790 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Slc26a7Q8R2Z3 656 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Olfr1353Q8VGU8 309 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ccdc65Q8VHI7 493 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Znf622Q91VY9 476 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gimap4Q99JY3 219 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ephx1Q9D379 455 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Q9D454 513 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Irx5Q9JKQ4 484 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Klrc2Q9WTJ9 238 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Sgk1Q9WVC6 431 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 MgamB5THE2 1827 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Cdh23Q99PF4 3354 aa23.45■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Tmem215A7E1Z1 235 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 JrklB2RRL2 523 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Mroh5E9PUJ8 762 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 SrgnP13609 152 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Adamts8P57110 905 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 YwhazP63101 245 aaKnown RBP23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 GsapQ3TCV3 858 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Cyp3a13Q64464 503 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Tdpoz4Q6YCH2 370 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Fbxo38Q8BMI0 1194 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 E330017A01RikQ8BU47 192 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Hmgcll1Q8JZS7 343 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Lpin3Q99PI4 848 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Cox16Q9CR63 106 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Tmco5aQ9D9D5 303 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Fundc1Q9DB70 155 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Bmp15Q9Z0L4 392 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Igkv5-45A0A0B4J1J1 115 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ralgps1A2AR50 585 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Skint6A7XUZ6 1240 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gm5795E9PZN8 263 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Olfr731F8VQB9 326 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Pold2O35654 469 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Tsta3P23591 321 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Pon1P52430 355 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Rpl10aP53026 217 aaKnown RBP23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Itga11P61622 1188 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Igsf9Q05BQ1 1179 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Tmem26Q3UP23 366 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Q3UTZ3 580 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gm13103Q4VAD2 491 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Tdrd5Q5VCS6 1040 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Defb34Q7TNV8 81 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gpr62Q80UC6 358 aa23.44■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ppfia2Q8BSS9 1257 aa23.44■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms