RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gabbr2Q80T41 940 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Smad3Q8BUN5 425 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Plekhs1Q8BW88 474 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Art3Q8R2G4 371 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Usp15Q8R5H1 981 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Fkbp6Q91XW8 327 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 PlekQ9JHK5 350 aaKnown RBP10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ppp2r3cQ9JK24 453 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Map3k14Q9WUL6 942 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Sgk1Q9WVC6 431 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gm12695A2AGB2 545 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 5830411N06RikB3F5L4 1112 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tcp10cE9Q046 482 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gm3460E9QAI8 215 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Pdia4P08003 638 aaKnown RBP10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gdpd4Q3TT99 632 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 AcdQ5EE38 416 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tsr1Q5SWD9 803 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Arnt2Q61324 712 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tdpoz3Q717B4 365 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Trit1Q80UN9 467 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Fra10ac1Q8BP78 315 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Nup54Q8BTS4 510 aaKnown RBP10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cacnb2Q8CC27 655 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Arhgap18Q8K0Q5 663 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rprd1aQ8VDS4 312 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cep19Q9CQA8 163 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Slc22a3Q9WTW5 551 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Usp51B1AY15 661 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 TyrobpO54885 114 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Usp2O88623 613 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Hoxb8P09632 243 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cyb5r4Q3TDX8 528 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Znf185Q62394 352 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Fez2Q6TYB5 348 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Trnau1apQ80VC6 287 aaKnown RBP10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ppp1r15bQ8BFW3 697 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ccdc17Q8CE13 565 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Grpel1Q99LP6 217 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Thumpd2Q9CZB3 528 aa10.27□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Zfp626A0A0U1RQ84 676 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Zscan5bB2RTN3 468 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 E9QMW4 1145 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 LdhcP00342 332 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ca3P16015 260 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Plk2P53351 682 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 PolgP54099 1218 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Znf746Q3U133 652 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Vmn1r64Q8R2B8 320 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Nxnl1Q8VC33 217 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Olfr1502Q8VG66 316 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Cldnd1Q9CQX5 253 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Prl2a1Q9JHK0 228 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ccdc86Q9JJ89 426 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Diaph3Q9Z207 1171 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Dock1Q8BUR4 1865 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Scgb2b7D3YYY1 112 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 PtproE9Q612 1226 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ms4a1P19437 291 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 TubP50586 505 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Eif3eP60229 445 aaKnown RBP10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Smpdl3aP70158 445 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Pdcd1Q02242 288 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ccdc185Q3V118 621 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Mtus1Q5HZI1 1210 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Trim38Q5SZ99 471 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Slc39a4Q78IQ7 660 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Olfr20Q7TRX9 314 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Hmgxb4Q80Y32 594 aaKnown RBP10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ier5lQ99J55 406 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Pld1Q9Z280 1074 aa10.27□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Pcdh7A0A0A6YY83 1255 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Acnat1A2AKK5 416 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 CntrlA2AL36 2334 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Znf518bB2RRE4 1077 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Zfp651E9PZ11 729 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Gm6205E9PZS2 359 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Atf6F6VAN0 656 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Cyp4f40G3UW81 524 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Btg3P50615 252 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Upp1P52624 311 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Rp1P56716 2095 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 SiaeP70665 541 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 GsapQ3TCV3 858 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Fam8a1Q3URQ4 399 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 PkdccQ5RJI4 492 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Itga3Q62470 1053 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Spag7Q7TNE3 227 aaKnown RBP10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Itpk1Q8BYN3 419 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Gm6367Q8C6L9 287 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Lims2Q91XD2 341 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Arl2bpQ9D385 163 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Rexo2Q9D8S4 237 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Tsga13Q9DA17 273 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Gm5538W4VSP6 401 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Tp53bp1P70399 1969 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 F6Y6L6 278 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Sec24cG3X972 1096 aaKnown RBP10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ercc2O08811 760 aaKnown RBP10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Kcnj2P35561 428 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 102 ms