RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Atg16l2Q6KAU8 623 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ssxb5Q6XAS2 159 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pomgnt2Q8BW41 605 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Abi3Q8BYZ1 367 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ugt3a2Q8JZZ0 523 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Caap1Q8VDY9 356 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pip4k2cQ91XU3 421 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 NamptQ99KQ4 491 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fgfr1op2Q9CRA9 253 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc27a2O35488 620 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 GckP52792 465 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rrp36Q3UFY0 244 aaKnown RBP12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Arl13bQ640N2 427 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tpp2Q64514 1262 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Phc3Q8CHP6 981 aa12.2□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Oas1eA0A0J9YV76 386 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tgm2P21981 686 aaKnown RBP12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Glb1P23780 647 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Irx2P81066 474 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tmem199Q5SYH2 208 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Podnl1Q6P3Y9 559 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Smg5Q6ZPY2 1017 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Acap2Q6ZQK5 770 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr20Q7TRX9 314 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Uroc1Q8VC12 676 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Frmd4bQ920B0 1035 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ergic2Q9CR89 377 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Clca1Q9D7Z6 913 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rdh14Q9ERI6 334 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Acsl4Q9QUJ7 711 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Phtf1Q9QZ09 761 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 0610012G03RikA0A0J9YTR2 95 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 4930469K13RikA0A286YDB2 92 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Siah3B2RWG3 268 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 ZufspQ3T9Z9 577 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Arhgap1Q5FWK3 439 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Arnt2Q61324 712 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Trub1Q8C0D0 338 aaKnown RBP12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 AmotQ8VHG2 1126 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fam227bQ9D518 532 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dbn1Q9QXS6 706 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fzd9Q9R216 592 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr1023A2ASU6 311 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Vmn2r27D3YUK6 857 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ces1bD3Z5G7 567 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Bmpr2O35607 1038 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pax3P24610 479 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Serpina3cP29621 417 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tbx1P70323 479 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Aars2Q14CH7 980 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 MyrflQ3UN70 904 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Bpifb5Q3UQ05 490 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tars2Q3UQ84 723 aaKnown RBP12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Xpnpep1Q6P1B1 623 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Sarm1Q6PDS3 724 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cand2Q6ZQ73 1235 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Mrpl57Q9CQF8 102 aaKnown RBP12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ndufaf1Q9CWX2 328 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Duoxa2Q9D311 320 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 TtpalQ9D3D0 343 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 TfgQ9Z1A1 397 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dhx15O35286 795 aaKnown RBP12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Itga11P61622 1188 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Atp6v1b2P62814 511 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ctnnb1Q02248 781 aaKnown RBP12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 P3h1Q3V1T4 739 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Lrrc47Q505F5 581 aaKnown RBP12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 ScinQ60604 715 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Hif1aQ61221 836 aaKnown RBP12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Lrrc27Q80YS5 523 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ube2q2Q8K2Z8 378 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 4933428M09RikQ9D3X3 192 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Peak1Q69Z38 1735 aa12.19□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gucy2dA0A0U1RPR8 1117 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Vwa5b1A9Z1V5 1215 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 FaahO08914 579 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pold2O35654 469 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ccdc40Q8BI79 1192 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Zbtb33Q8BN78 671 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pyhin1Q8BV49 420 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Mbtps2Q8CHX6 515 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pgam1Q9DBJ1 254 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc15a2Q9ES07 729 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm27029A2A4P4 543 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr310B2RVZ1 332 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Wee1P47810 646 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pdss1Q33DR2 409 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Nat9Q3UG98 241 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gtf2h3Q8VD76 309 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr345Q8VGK4 311 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ralgps2Q9ERD6 590 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cyb561d2Q9WUE3 222 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pck1Q9Z2V4 622 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Krt6bQ9Z331 562 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 AfdnQ9QZQ1 1820 aaKnown RBP12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 L3mbtl1A2A5N8 826 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Lzts3A2AHG0 700 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ttc30a2A2AKQ8 664 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ptchd4B9EKX1 904 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Nr3c1P06537 783 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms