RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 GatmQ9D964 423 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ccdc103Q9D9P2 237 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Spock2Q9ER58 423 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Map3k14Q9WUL6 942 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 M1apQ9Z0E1 529 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Cacna2d3Q9Z1L5 1091 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Brca1P48754 1812 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PcntP48725 2898 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Supt3B0QZW4 406 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Taf4E9QAP7 1042 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Kdelc2G5E897 503 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Bmpr2O35607 1038 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Atxn10P28658 475 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Drg1P32233 367 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PolgP54099 1218 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Tubgcp3P58854 905 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Epas1P97481 874 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 CkbQ04447 381 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Trcg1Q58Y74 825 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 AcdQ5EE38 416 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Dnajc1Q61712 552 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Krt32Q62168 407 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 DgkqQ6P5E8 934 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Chsy1Q6ZQ11 800 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Stambpl1Q76N33 436 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ppfia2Q8BSS9 1257 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ccdc134Q8C7V8 229 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Aldh4a1Q8CHT0 562 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Rprd1aQ8VDS4 312 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 AticQ9CWJ9 592 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Nme7Q9QXL8 395 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fut8Q9WTS2 575 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Epm2aQ9WUA5 330 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Myo18aQ9JMH9 2050 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ppfia4B8QI36 1187 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Shoc2O88520 582 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 AcrP23578 436 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 ZfaP23607 742 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Itgb7P26011 806 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fen1P39749 378 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PfkmP47857 780 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 HpdP49429 393 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 TubP50586 505 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Itga11P61622 1188 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gabrb2P63137 512 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Casp4P70343 373 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Serpina5P70458 405 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fmo3P97501 534 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 SobpQ0P5V2 864 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Syn2Q64332 586 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Glra2Q7TNC8 452 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Rbm12b1Q80YR9 836 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Dupd1Q8BK84 215 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ldhal6bQ8BVP2 382 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Q8BZE1 841 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fbxl13Q8CDU4 790 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fbxw7Q8VBV4 629 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Lpgat1Q91YX5 370 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 B4galt3Q91YY2 395 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Msi2Q920Q6 346 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PigoQ9JJI6 1093 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Foxe3Q9QY14 288 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gys1Q9Z1E4 738 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Col11a1Q61245 1804 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 CntrlA2AL36 2334 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Spata31d1aE9QA35 1336 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 F6Y6L6 278 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Calhm3J3QMI4 347 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Kifc3O35231 824 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Per3O70361 1113 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Npas2P97460 816 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Grm6Q5NCH9 871 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Rtl3Q6P1Y1 553 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fam185aQ7TPD2 378 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 AopepQ8BXQ6 817 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Afap1l1Q8BZI0 768 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Wdr59Q8C0M0 992 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Dmtf1Q8CE22 761 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Smim14Q91VT8 99 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Xpo6Q924Z6 1125 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Dok4Q99KE3 325 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ska2Q9CR46 120 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Sgf29Q9DA08 293 aaKnown RBP8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Smg9Q9DB90 520 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Adamts6D3Z1A5 1117 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Morc3F7BJB9 942 aaKnown RBP8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Pdcd2P46718 343 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 YwhaqP68254 245 aaKnown RBP8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Cyp2c65Q148B1 490 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 TchpQ3TVW5 497 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 1810049J17RikQ3V2G9 153 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Sh3gl2Q62420 352 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Olfr698Q7TRN4 311 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Sytl5Q80T23 753 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Il17reQ8BH06 637 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ttc39bQ8BYY4 617 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Pde10aQ8CA95 790 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Taf10Q8K0H5 218 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gtse1Q8R080 741 aa8.06□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Lrrc8cQ8R502 803 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms