RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 DDR2Q16832 855 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 LONRF1Q17RB8 773 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 P3H1Q32P28 736 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 HP1BP3Q5SSJ5 553 aaPredicted RBP8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 SPOUT1Q5T280 376 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 FAM102AQ5T9C2 384 aaPredicted RBP8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 ANKS1BQ7Z6G8 1248 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 SPATS2Q86XZ4 545 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 CCDC13Q8IYE1 715 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 VPS52Q8N1B4 723 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 MDM1Q8TC05 714 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 PPM1EQ8WY54 764 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 ZNF558Q96NG5 402 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 LRRC19Q9H756 370 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 SAYSD1Q9NPB0 183 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 DDX56Q9NY93 547 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 IKBKGQ9Y6K9 419 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 F8VP50 259 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 SOD2P04179 222 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 SNX16P57768 344 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 DSG1Q02413 1049 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 CTXN3Q4LDR2 81 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 ATP13A4Q4VNC1 1196 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 TXNRD3NBQ6F5E7 133 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 PHOSPHO2Q8TCD6 241 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 EPS8L3Q8TE67 593 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 PIK3R5Q8WYR1 880 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 TNIP3Q96KP6 325 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 C9orf72Q96LT7 481 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 ZBED2Q9BTP6 218 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 WHRNQ9P202 907 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 KIAA1257Q9ULG3 409 aa8.54□□□□□ -1.04
CACNA1A-232ENST00000636966 TRIM66O15016 1216 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 SHBGP04278 402 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ATF6P18850 670 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 PTGIRP43119 386 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ARPP19P56211 112 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ROR1Q01973 937 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 TCEAL1Q15170 157 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 CCNG2Q16589 344 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 RAB41Q5JT25 222 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 SLC8B1Q6J4K2 584 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 DDX53Q86TM3 631 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ZNF473Q8WTR7 871 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 SLC9A7Q96T83 725 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 LBHD1Q9BQE6 289 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 MAGEB5Q9BZ81 275 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 NGRNQ9NPE2 291 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 OSER1Q9NX31 292 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 MTRRQ9UBK8 725 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 DSEQ9UL01 958 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 WDFY4Q6ZS81 3184 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 MTMR11A4FU01 709 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 AP1G2O75843 785 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 AGTP01019 485 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 SPATA31D3P0C874 917 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 LCP1P13796 627 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 BST2Q10589 180 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 KCNT1Q5JUK3 1230 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 OTUD1Q5VV17 481 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 SPATA31D4Q6ZUB0 917 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 FIBCD1Q8N539 461 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ARHGEF2Q92974 986 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 MCRS1Q96EZ8 462 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ZBP1Q9H171 429 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 CDC42EP4Q9H3Q1 356 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ABI2Q9NYB9 513 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 WDR35Q9P2L0 1181 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 DENND4CQ5VZ89 1909 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 TMEM191CA6NGB0 347 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 GOLGA8MH3BSY2 632 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 H7C0C1 242 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 NDC80O14777 642 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 GRM6O15303 877 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 TEX28O15482 410 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 PRPSAP2O60256 369 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ECHS1P30084 290 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 STX2P32856 288 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 OR1D2P34982 312 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ATP5OP48047 213 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ATXN1P54253 815 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ADIGQ0VDE8 80 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 TTC31Q49AM3 519 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 MFSD7Q6UXD7 560 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 KATNAL2Q8IYT4 538 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 RBM15Q96T37 977 aaKnown RBP eCLIP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 METTL5Q9NRN9 209 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 ASNSD1Q9NWL6 643 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 SPG21Q9NZD8 308 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 TRIOBPQ9H2D6 2365 aa8.53□□□□□ -1.04
CACNA1A-232ENST00000636966 EXOC1LA0A1B0GW35 172 aa8.52□□□□□ -1.04
CACNA1A-232ENST00000636966 I6L893 689 aaPredicted RBP8.52□□□□□ -1.04
CACNA1A-232ENST00000636966 XPO1O14980 1071 aaKnown RBP8.52□□□□□ -1.04
CACNA1A-232ENST00000636966 MCF2LO15068 1137 aa8.52□□□□□ -1.04
CACNA1A-232ENST00000636966 RIPK2O43353 540 aa8.52□□□□□ -1.04
CACNA1A-232ENST00000636966 TRAPPC3O43617 180 aa8.52□□□□□ -1.04
CACNA1A-232ENST00000636966 CNPP09543 421 aaKnown RBP8.52□□□□□ -1.04
CACNA1A-232ENST00000636966 CHN1P15882 459 aa8.52□□□□□ -1.04
CACNA1A-232ENST00000636966 PCSK1P29120 753 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms