RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 GIT2Q14161 759 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 TCEA2Q15560 299 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 C16orf59Q7L2K0 433 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 SUGP1Q8IWZ8 645 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 USP7Q93009 1102 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 ERGIC2Q96RQ1 377 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 KCTD14Q9BQ13 255 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 TRIM17Q9Y577 477 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 CLTBP09497 229 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 TPBGLP0DKB5 382 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 INSRRP14616 1297 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 VEGFAP15692 232 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 PTPN3P26045 913 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 BNIPLQ7Z465 357 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 NACC2Q96BF6 587 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 DLGAP3O95886 979 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 CCND1P24385 295 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 DSG1Q02413 1049 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 NFIAQ12857 509 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 SETMARQ53H47 684 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 ZNF544Q6NX49 715 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 METTL7BQ6UX53 244 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 MACC1Q6ZN28 852 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 SLC22A9Q8IVM8 553 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 SNCAIPQ9Y6H5 919 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 FLT3P36888 993 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 TUBP50607 506 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 ELAVL2Q12926 359 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 MFSD10Q14728 455 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 PTPAQ15257 358 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 RCN1Q15293 331 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 PKN1Q16512 942 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 NOL9Q5SY16 702 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 TYW3Q6IPR3 259 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 POMGNT2Q8NAT1 580 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 SMARCD1Q96GM5 515 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 BBS4Q96RK4 519 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 NAT9Q9BTE0 207 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 CEP41Q9BYV8 373 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 ZFYVE1Q9HBF4 777 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 PARVBQ9HBI1 364 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 RPRD1BQ9NQG5 326 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 XPNPEP3Q9NQH7 507 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 DDNO94850 711 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 SERPINF2P08697 491 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 RBP1P09455 135 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 CNPP09543 421 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 ACAT1P24752 427 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 ADORA2AP29274 412 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 PEX5P50542 639 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 NDST1P52848 882 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 INTS5Q6P9B9 1019 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 ELOA2Q8IYF1 753 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 OMDQ99983 421 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 ZNF518BQ9C0D4 1074 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 CARD9Q9H257 536 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 HMX1Q9NP08 348 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 AKAP7Q9P0M2 348 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 BARX2Q9UMQ3 279 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 N6AMT1Q9Y5N5 214 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 A0A087X0T9 212 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 NDUFS2O75306 463 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 FAM228BP0C875 321 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 CNTFP26441 200 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 HERVK_113P62684 666 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 NFIL3Q16649 462 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 NECAB2Q7Z6G3 386 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 GATAD2AQ86YP4 633 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 MTFMTQ96DP5 389 aaKnown RBP12.05□□□□□ -0.48
SHPRH-211ENST00000629427 PRRG3Q9BZD7 231 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 CYP3A43Q9HB55 503 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 SETBP1Q9Y6X0 1596 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 CAPN1P07384 714 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 CSNK2BP67870 215 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 HDDC2Q7Z4H3 204 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 CYP4Z2PQ8N1L4 340 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 DAGLBQ8NCG7 672 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 OSCP1Q8WVF1 389 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 SYT15Q9BQS2 421 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 VTA1Q9NP79 307 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 DIP2AQ14689 1571 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 MANSC4A6NHS7 340 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-211ENST00000629427 TMEM114B3SHH9 223 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 RAD51BO15315 384 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-211ENST00000629427 CTDNEP1O95476 244 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 PTPN11Q06124 597 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-211ENST00000629427 Q4G0T1 1027 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 CASKIN2Q8WXE0 1202 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 SH3GL3Q99963 347 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 SNX13Q9Y5W8 968 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 NCAM2O15394 837 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 XYLBO75191 536 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 LTFP02788 710 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 POLR2EP19388 210 aaKnown RBP12.04□□□□□ -0.48
SHPRH-211ENST00000629427 ZSWIM2Q8NEG5 633 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 USP6NLQ92738 828 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 ZCCHC2Q9C0B9 1178 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms