RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 ZNF622Q969S3 477 aaKnown RBP eCLIP3.53□□□□□ -1.841e-7■□□□□ 9.8
CNOT1-223ENST00000628857 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.53□□□□□ -1.841e-8■■■■□ 19.6
CNOT1-223ENST00000628857 UBA5Q9GZZ9 404 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 CHMP4BQ9H444 224 aaKnown RBP3.53□□□□□ -1.84
CNOT1-223ENST00000628857 CERS4Q9HA82 394 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 USP29Q9HBJ7 922 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 ARFGAP3Q9NP61 516 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 KCNK9Q9NPC2 374 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 GJB4Q9NTQ9 266 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 SLC52A1Q9NWF4 448 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 PI4KBQ9UBF8 816 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 LPAR3Q9UBY5 353 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 NFU1Q9UMS0 254 aa3.53□□□□□ -1.84
CNOT1-223ENST00000628857 SIRT4Q9Y6E7 314 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-223ENST00000628857 SMIM35A0A1B0GVV1 85 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 FAM234BA2RU67 622 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 E5RJQ4 531 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 PODXLO00592 558 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 FYB1O15117 783 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 CTIFO43310 598 aaKnown RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 PRAMEF2O60811 474 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 MYL3P08590 195 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 IFIT2P09913 472 aaKnown RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 ATP5F1P24539 256 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 TACR3P29371 465 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 GALNSP34059 522 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 HOXD12P35452 270 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 IGHMBP2P38935 993 aaKnown RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 ABCG1P45844 678 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 CDK7P50613 346 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 POLE2P56282 527 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 CSHL1Q14406 222 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 GLE1Q53GS7 698 aaKnown RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 TMEM196Q5HYL7 178 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 ZNF425Q6IV72 752 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 CCDC144NLQ6NUI1 221 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 MIS18BP1Q6P0N0 1132 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 FBXO38Q6PIJ6 1188 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 PIK3AP1Q6ZUJ8 805 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 YTHDF3Q7Z739 585 aaKnown RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 P3H2Q8IVL5 708 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 SYTL1Q8IYJ3 562 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 C16orf71Q8IYS4 520 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 NME8Q8N427 588 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 GRAMD1AQ96CP6 724 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 COQ8BQ96D53 544 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 SAP30LQ9HAJ7 183 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 ERVK-5Q9HDB9 667 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 ABHD10Q9NUJ1 306 aa3.52□□□□□ -1.85
CNOT1-223ENST00000628857 TUBA8Q9NY65 449 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 UBE2J1Q9Y385 318 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-223ENST00000628857 CA12O43570 354 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 CNOT3O75175 753 aaKnown RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 MOSPD3O75425 235 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 ANXA6P08133 673 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 CD63P08962 238 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 PECAM1P16284 738 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 SFPQP23246 707 aaKnown RBP eCLIP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 CALRP27797 417 aaKnown RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 MPGP29372 298 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 TECP42680 631 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 GSTM5P46439 218 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 WDR5P61964 334 aaKnown RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 GHRHRQ02643 423 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 CFHR1Q03591 330 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 SRSF1Q07955 248 aaKnown RBP eCLIP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 LAMB3Q13751 1172 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 UBE4AQ14139 1066 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 MORC3Q14149 939 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 WDR78Q5VTH9 848 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 ZNF626Q68DY1 528 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 RINLQ6ZS11 566 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 LAS2Q8IYD9 372 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 CCDC146Q8IYE0 955 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 NRSN1Q8IZ57 195 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 OSR1Q8TAX0 266 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 PARD3BQ8TEW8 1205 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 WDR60Q8WVS4 1066 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 DDB2Q92466 427 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 SMG7Q92540 1137 aaKnown RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 MAP4K1Q92918 833 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 EID2BQ96D98 161 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 SLC39A13Q96H72 371 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 ZNF845Q96IR2 970 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 SENP7Q9BQF6 1050 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 EFHD1Q9BUP0 239 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 TTLL2Q9BWV7 592 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 GATA5Q9BWX5 397 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 QTRT1Q9BXR0 403 aaKnown RBP3.51□□□□□ -1.85
CNOT1-223ENST00000628857 NUAK2Q9H093 628 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 AS3MTQ9HBK9 375 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 CHST12Q9NRB3 414 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 TNFRSF18Q9Y5U5 241 aa3.51□□□□□ -1.85
CNOT1-223ENST00000628857 CCDC187A0A096LP49 1063 aa3.5□□□□□ -1.85
CNOT1-223ENST00000628857 PNMA6EA0A0J9YXQ4 647 aa3.5□□□□□ -1.85
CNOT1-223ENST00000628857 CCDC194A0A1B0GVG4 234 aa3.5□□□□□ -1.85
CNOT1-223ENST00000628857 NPC1O15118 1278 aa3.5□□□□□ -1.85
CNOT1-223ENST00000628857 TP73O15350 636 aa3.5□□□□□ -1.85
CNOT1-223ENST00000628857 FFAR2O15552 330 aa3.5□□□□□ -1.85
CNOT1-223ENST00000628857 PEX14O75381 377 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms