RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 COQ8BQ96D53 544 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 APIPQ96GX9 242 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 WDYHV1Q96HA8 205 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 FAM204AQ9H8W3 233 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 PANK3Q9H999 370 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 DKK4Q9UBT3 224 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 USP32Q8NFA0 1604 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 SLIT1O75093 1534 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 NPHP4O75161 1426 aaPredicted RBP5.98□□□□□ -1.45
VPS29-212ENST00000621131 PARD3Q8TEW0 1356 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 JCADQ9P266 1359 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 NPC1L1Q9UHC9 1359 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 PLEKHG1Q9ULL1 1385 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 DSCR3O14972 297 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 HRGP04196 525 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 TXNP10599 105 aaKnown RBP5.97□□□□□ -1.45
VPS29-212ENST00000621131 IL1R1P14778 569 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 BTF3P20290 206 aaKnown RBP5.97□□□□□ -1.45
VPS29-212ENST00000621131 ITGA8P53708 1063 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 CACNB3P54284 484 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 SLC29A2Q14542 456 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 TMEM63BQ5T3F8 832 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 PXDC1Q5TGL8 231 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 ZNF772Q68DY9 489 aaPredicted RBP5.97□□□□□ -1.45
VPS29-212ENST00000621131 SESTD1Q86VW0 696 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 FAM156AQ8NDB6 213 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 STK26Q9P289 416 aa5.97□□□□□ -1.45
VPS29-212ENST00000621131 NHSL1Q5SYE7 1610 aa5.96□□□□□ -1.45
VPS29-212ENST00000621131 NRXN3Q9Y4C0 1643 aa5.96□□□□□ -1.45
VPS29-212ENST00000621131 TULP4Q9NRJ4 1543 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 EXOC5O00471 708 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 KCNAB3O43448 404 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 PIAS2O75928 621 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 CPT1AP50416 773 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 PGDP52209 483 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 LAMB3Q13751 1172 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 LARS2Q15031 903 aaKnown RBP5.96□□□□□ -1.46
VPS29-212ENST00000621131 AWAT1Q58HT5 328 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 LIX1LQ8IVB5 337 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 FAM9BQ8IZU0 186 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 C16orf52Q8NHV5 167 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 LRTOMTQ8WZ04 291 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 LRRC27Q9C0I9 530 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 SNX15Q9NRS6 342 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 MID2Q9UJV3 735 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 RGS12O14924 1447 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 ARHGAP23Q9P227 1491 aa5.96□□□□□ -1.46
VPS29-212ENST00000621131 COL16A1Q07092 1604 aaPredicted RBP5.96□□□□□ -1.46
VPS29-212ENST00000621131 NSD2O96028 1365 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 ABCC11Q96J66 1382 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 RAB27BO00194 218 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 TMPRSS11DO60235 418 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 PARP1P09874 1014 aaKnown RBP5.95□□□□□ -1.46
VPS29-212ENST00000621131 ACVR2AP27037 513 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 HOXD9P28356 352 aaPredicted RBP5.95□□□□□ -1.46
VPS29-212ENST00000621131 MCM5P33992 734 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 MTHFSP49914 203 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 CFHR3Q02985 330 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 ZNF268Q14587 947 aaPredicted RBP5.95□□□□□ -1.46
VPS29-212ENST00000621131 POLD3Q15054 466 aaPredicted RBP5.95□□□□□ -1.46
VPS29-212ENST00000621131 CC2D1BQ5T0F9 858 aaKnown RBP5.95□□□□□ -1.46
VPS29-212ENST00000621131 DENND2CQ68D51 928 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 SRGAP1Q7Z6B7 1085 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 METTL25Q8N6Q8 603 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 MAFAQ8NHW3 353 aaPredicted RBP5.95□□□□□ -1.46
VPS29-212ENST00000621131 PIGOQ8TEQ8 1089 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 MAP4K1Q92918 833 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 KAZALD1Q96I82 304 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 PRAM1Q96QH2 718 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 TRNAU1APQ9NX07 287 aaKnown RBP5.95□□□□□ -1.46
VPS29-212ENST00000621131 TERF2IPQ9NYB0 399 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 HDAC9Q9UKV0 1011 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 OGDHLQ9ULD0 1010 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 ASAP1Q9ULH1 1129 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 CAPN11Q9UMQ6 739 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 AFG3L2Q9Y4W6 797 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 CGNL1Q0VF96 1302 aa5.95□□□□□ -1.46
VPS29-212ENST00000621131 SHPRHQ149N8 1683 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 ANKRD36BQ8N2N9 1353 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 PHLPP1O60346 1717 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 TECPR2O15040 1411 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 NSD3Q9BZ95 1437 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 TSPAN6O43657 245 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 MAP4K4O95819 1239 aaPredicted RBP5.94□□□□□ -1.46
VPS29-212ENST00000621131 ZBED1O96006 694 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 FGBP02675 491 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 S100BP04271 92 aaPredicted RBP5.94□□□□□ -1.46
VPS29-212ENST00000621131 DEUP1Q05D60 604 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 WDR43Q15061 677 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS29-212ENST00000621131 SEC23BQ15437 767 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 KIAA0753Q2KHM9 967 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 PLAG1Q6DJT9 500 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 AWAT2Q6E213 333 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 DARS2Q6PI48 645 aaKnown RBP5.94□□□□□ -1.46
VPS29-212ENST00000621131 TMEM65Q6PI78 240 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 RANBP10Q6VN20 620 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 CCDC149Q6ZUS6 474 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 USP49Q70CQ1 688 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 NANOGP1Q8N7R0 232 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 OSR1Q8TAX0 266 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms