RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 NDUFV2P19404 249 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 BRD2P25440 801 aaKnown RBP23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 DAOAP59103 153 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 KCNH2Q12809 1159 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 PAK1Q13153 545 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 IL31Q6EBC2 164 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 ARMCX6Q7L4S7 300 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 LPCAT2Q7L5N7 544 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 FMNL3Q8IVF7 1028 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 SIX6OS1Q8N1H7 587 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 SCML4Q8N228 414 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 CPXM2Q8N436 756 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 RBBP8NLQ8NC74 664 aaPredicted RBP23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 IPO4Q8TEX9 1081 aaKnown RBP23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 PIWIL1Q96J94 861 aaKnown RBP23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 KREMEN1Q96MU8 473 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 OLA1Q9NTK5 396 aaKnown RBP23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 SFMBT1Q9UHJ3 866 aa23.24■■□□□ 1.31
NEDD4L-237ENST00000617539 MUC22E2RYF6 1773 aaPredicted RBP23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 PIK3R2O00459 728 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 LCP1P13796 627 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 RGS7P49802 495 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 GCNT1Q02742 428 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 CNGA2Q16280 664 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 RNF43Q68DV7 783 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 EHBP1Q8NDI1 1231 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 PIGKQ92643 395 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 SLC6A17Q9H1V8 727 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 CD93Q9NPY3 652 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 CNGB3Q9NQW8 809 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 TMEM74BQ9NUR3 256 aa23.23■■□□□ 1.31
NEDD4L-237ENST00000617539 CKAP5Q14008 2032 aa23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 M0QYV0 167 aa23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 GFRA2O00451 464 aa23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 MAP3K13O43283 966 aa23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 MSI1O43347 362 aaKnown RBP23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 CLEC4CQ8WTT0 213 aa23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 DDX1Q92499 740 aaKnown RBP23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 MED15Q96RN5 788 aa23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 SRRTQ9BXP5 876 aaKnown RBP23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 HBS1LQ9Y450 684 aaKnown RBP23.22■■□□□ 1.31
NEDD4L-237ENST00000617539 PI4KAP42356 2102 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 GON4LQ3T8J9 2241 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 CETN1Q12798 172 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 ENPP2Q13822 863 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 SDE2Q6IQ49 451 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 MSANTD2Q6P1R3 559 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 RNF139Q8WU17 664 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 LSM14BQ9BX40 385 aaKnown RBP23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 INTS2Q9H0H0 1204 aaKnown RBP23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 ABCC13Q9NSE7 274 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 STOML2Q9UJZ1 356 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 CNTN6Q9UQ52 1028 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 STON1Q9Y6Q2 735 aa23.21■■□□□ 1.31
NEDD4L-237ENST00000617539 ATXN2Q99700 1313 aaKnown RBP23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 IGHV1OR15-9A0A0B4J2B8 117 aa23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 KHNYNO15037 678 aaKnown RBP23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 GNA14O95837 355 aa23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 AFPP02771 609 aaKnown RBP23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 KCNA4P22459 653 aa23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 HOXD9P28356 352 aaPredicted RBP23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 IRX4P78413 519 aa23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 BYSLQ13895 437 aaKnown RBP23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 SPDYCQ5MJ68 293 aa23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 TMEM215Q68D42 235 aa23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 MRGPRX1Q96LB2 322 aa23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 ADAMTS9Q9P2N4 1935 aa23.2■■□□□ 1.3
NEDD4L-237ENST00000617539 C4orf47A7E2U8 309 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 CDX4O14627 284 aaPredicted RBP23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 IGLV3-27P01718 113 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 CYBBP04839 570 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 ITPKAP23677 461 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 IL12RB1P42701 662 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 STILQ15468 1287 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 CAMK4Q16566 473 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 PEAR1Q5VY43 1037 aaPredicted RBP23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 LYSMD4Q5XG99 296 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 ANKS1BQ7Z6G8 1248 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 DEFB119Q8N690 84 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 TRIML1Q8N9V2 468 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 DDI1Q8WTU0 396 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 SORCS1Q8WY21 1168 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 IRGQQ8WZA9 623 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 KIAA1468Q9P260 1216 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 THAP10Q9P2Z0 257 aaPredicted RBP23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 EVLQ9UI08 416 aaPredicted RBP23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 PILRBQ9UKJ0 227 aa23.19■■□□□ 1.3
NEDD4L-237ENST00000617539 PCDH15Q96QU1 1955 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 TSPAN3O60637 253 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 FYNP06241 537 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 HARS2P49590 506 aaKnown RBP23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 SGSHP51688 502 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 RPL6Q02878 288 aaKnown RBP23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 FUT11Q495W5 492 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 SYT12Q8IV01 421 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 CNTNAP3BQ96NU0 1288 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 SLC2A11Q9BYW1 496 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 CNTNAP3Q9BZ76 1288 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 CYP8B1Q9UNU6 501 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms