RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 PTPN1P18031 435 aaKnown RBP19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 GPC1P35052 558 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 NT5DC1Q5TFE4 455 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 TKTL2Q9H0I9 626 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 COPS7BQ9H9Q2 264 aaPredicted RBP19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 POPDC2Q9HBU9 364 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 PCDH9Q9HC56 1237 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 KLC4Q9NSK0 619 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 TNFSF13BQ9Y275 285 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 RBAK-RBAKDNI3L0D1 243 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 MGAT5Q09328 741 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 CDH17Q12864 832 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 TRIP10Q15642 601 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 POTEAQ6S8J7 498 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 INPP5DQ92835 1189 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 UXTQ9UBK9 157 aaPredicted RBP19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 DEPDC5O75140 1603 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 KPNA3O00505 521 aaPredicted RBP19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 PYGMP11217 842 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 ITGB6P18564 788 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 AASDHQ4L235 1098 aaPredicted RBP19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 ZMYM2Q9UBW7 1377 aa19.03■□□□□ 0.64
AC008878.3-201ENST00000617428 SCAMP3O14828 347 aaKnown RBP19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 NFICP08651 508 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 MAP3K10Q02779 954 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 CRY2Q49AN0 593 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 TJAP1Q5JTD0 557 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 ZNF555Q8NEP9 628 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 WDR48Q8TAF3 677 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 MRPS6P82932 125 aaKnown RBP19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 STX5Q13190 355 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 TMED1Q13445 227 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 APBA2Q99767 749 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 TPST1O60507 370 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 FGFR1P11362 822 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 GRK3P35626 688 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 LZTR1Q8N653 840 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 B4GALNT2Q8NHY0 566 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 ACP6Q9NPH0 428 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 SPACA6W5XKT8 324 aa19.02■□□□□ 0.64
AC008878.3-201ENST00000617428 RBP1P09455 135 aa19.02■□□□□ 0.63
AC008878.3-201ENST00000617428 FLT3LGP49771 235 aa19.02■□□□□ 0.63
AC008878.3-201ENST00000617428 TPGS1Q6ZTW0 290 aa19.02■□□□□ 0.63
AC008878.3-201ENST00000617428 HNRNPLLQ8WVV9 542 aaKnown RBP19.02■□□□□ 0.63
AC008878.3-201ENST00000617428 NFKBIZQ9BYH8 718 aa19.02■□□□□ 0.63
AC008878.3-201ENST00000617428 ACTR8Q9H981 624 aa19.02■□□□□ 0.63
AC008878.3-201ENST00000617428 MRPL17Q9NRX2 175 aaKnown RBP19.02■□□□□ 0.63
AC008878.3-201ENST00000617428 MAFO75444 373 aaPredicted RBP19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 PRKCQQ04759 706 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 SGCGQ13326 291 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 LRRC34Q8IZ02 419 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 TMEM161BQ8NDZ6 487 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 ZNF558Q96NG5 402 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 CDT1Q9H211 546 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 L2HGDHQ9H9P8 463 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 WDR41Q9HAD4 459 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 HALP42357 657 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 CAPSQ13938 189 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 CCDC85BQ15834 202 aaPredicted RBP19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 TREML2Q5T2D2 321 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 KCNT2Q6UVM3 1135 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 C16orf59Q7L2K0 433 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 F8VP50 259 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 NUDT2P50583 147 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 NCALDP61601 193 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 TRMT11Q7Z4G4 463 aaKnown RBP19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 GALNT4Q8N4A0 578 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 NSL1Q96IY1 281 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 PHTF1Q9UMS5 762 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 DYRK1BQ9Y463 629 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 FKTNO75072 461 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 GJB1P08034 283 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 ELK3P41970 407 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 NME5P56597 212 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 PABPC1LQ4VXU2 614 aaKnown RBP19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 RPAINQ86UA6 219 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 C3orf20Q8ND61 904 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 LPPQ93052 612 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 TSC22D3Q99576 134 aa19.01■□□□□ 0.63
AC008878.3-201ENST00000617428 MED21Q13503 144 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 FUT11Q495W5 492 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 ERLEC1Q96DZ1 483 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 IFRD1O00458 451 aaPredicted RBP19■□□□□ 0.63
AC008878.3-201ENST00000617428 GLI1P08151 1106 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 CD52P31358 61 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 ATP5C1P36542 298 aaKnown RBP19■□□□□ 0.63
AC008878.3-201ENST00000617428 COPAP53621 1224 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 PTENP60484 403 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 FKBP1BP68106 108 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 GTF2BQ00403 316 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 DCLK3Q9C098 648 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 SEMA4AQ9H3S1 761 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 HEY2Q9UBP5 337 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 SPATA31C2B4DYI2 1134 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 RNF103O00237 685 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 CALCAP01258 141 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 BLVRAP53004 296 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 RNF168Q8IYW5 571 aaPredicted RBP19■□□□□ 0.63
AC008878.3-201ENST00000617428 NCKIPSDQ9NZQ3 722 aa19■□□□□ 0.63
AC008878.3-201ENST00000617428 CPA3P15088 417 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms