RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 GLI1P08151 1106 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 OR1E1P30953 314 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 ELK3P41970 407 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 CENPAP49450 140 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 MFSD4BQ5TF39 518 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 ZNF786Q8N393 782 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 AKT1S1Q96B36 256 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 LRRC4BQ9NT99 713 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 GPRC5DQ9NZD1 345 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 POLG2Q9UHN1 485 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 NAALADL1Q9UQQ1 740 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 TBKBP1A7MCY6 615 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 KCNK1O00180 336 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 CNTN2Q02246 1040 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 BTG3Q14201 252 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-227ENST00000616825 CCDC142Q17RM4 750 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 KHDRBS2Q5VWX1 349 aaKnown RBP18.18■□□□□ 0.5
ATXN2-227ENST00000616825 NT5DC3Q86UY8 548 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 ZNF410Q86VK4 478 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 SCUBE1Q8IWY4 988 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 TRAPPC12Q8WVT3 735 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 SMARCD1Q96GM5 515 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 COPG1Q9Y678 874 aaKnown RBP18.18■□□□□ 0.5
ATXN2-227ENST00000616825 FRMPD4Q14CM0 1322 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 YWHAQP27348 245 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 TUBP50607 506 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 CORO7P57737 925 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 TGM3Q08188 693 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 ILF2Q12905 390 aaKnown RBP18.18■□□□□ 0.5
ATXN2-227ENST00000616825 HTR3CQ8WXA8 447 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 ELOVL4Q9GZR5 314 aa18.18■□□□□ 0.5
ATXN2-227ENST00000616825 A1CFQ9NQ94 594 aaKnown RBP18.18■□□□□ 0.5
ATXN2-227ENST00000616825 AVENQ9NQS1 362 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-227ENST00000616825 TMEM114B3SHH9 223 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 E9PBE3 544 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 IFRD1O00458 451 aaPredicted RBP18.17■□□□□ 0.5
ATXN2-227ENST00000616825 KLHL41O60662 606 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 HPGDP15428 266 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 CALB2P22676 271 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 ADORA2AP29274 412 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 CDH8P55286 799 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 STARD3Q14849 445 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 AGKQ53H12 422 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 TLK2Q86UE8 772 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 LPCAT1Q8NF37 534 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 NFASCO94856 1347 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 RNF103O00237 685 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 PBLDP30039 288 aaPredicted RBP18.17■□□□□ 0.5
ATXN2-227ENST00000616825 CHI3L1P36222 383 aaPredicted RBP18.17■□□□□ 0.5
ATXN2-227ENST00000616825 RAD23AP54725 363 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 BBS2Q9BXC9 721 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 UBDO15205 165 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 H2AFXP16104 143 aaPredicted RBP18.17■□□□□ 0.5
ATXN2-227ENST00000616825 NME5P56597 212 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 RASA2Q15283 850 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 DACT2Q5SW24 774 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 DCLRE1BQ9H816 532 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 XPNPEP3Q9NQH7 507 aa18.17■□□□□ 0.5
ATXN2-227ENST00000616825 PDZK1P1A8MUH7 402 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 RBAK-RBAKDNI3L0D1 243 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 HMGCRP04035 888 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 ZNF7P17097 686 aaPredicted RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 EIF4BP23588 611 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 TUFMP49411 452 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 ALDH6A1Q02252 535 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 EARS2Q5JPH6 523 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 CBWD3Q5JTY5 395 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 CBWD5Q5RIA9 395 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 APOBEC3HQ6NTF7 200 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 CYB5D1Q6P9G0 228 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 MFSD7Q6UXD7 560 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 SCUBE3Q8IX30 993 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 DEFB106AQ8N104 65 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 SLC2A14Q8TDB8 520 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 FAM120BQ96EK7 910 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 DNALI1O14645 258 aaPredicted RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 GUCA1AP43080 201 aaPredicted RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 NR2C2P49116 596 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 PRKAA1Q13131 559 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 ACAP1Q15027 740 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 TMEM119Q4V9L6 283 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 DNAAF5Q86Y56 855 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 TMEM159Q96B96 161 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 DDX4Q9NQI0 724 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 TRIM13O60858 407 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 MT-CO1P00395 513 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 NQO1P15559 274 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 AMPD1P23109 780 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 POU1F1P28069 291 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 C11orf74Q86VG3 221 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 FUCA2Q9BTY2 467 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 MRPL9Q9BYD2 267 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 ZCCHC2Q9C0B9 1178 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 TAS2R13Q9NYV9 303 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 PCDH8O95206 1070 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 MFSD10Q14728 455 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 KPNB1Q14974 876 aaKnown RBP18.16■□□□□ 0.5
ATXN2-227ENST00000616825 IQSEC1Q6DN90 963 aa18.16■□□□□ 0.5
ATXN2-227ENST00000616825 WDR59Q6PJI9 974 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms