RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 NAMPTP43490 491 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 SF3B3Q15393 1217 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 LYNP07948 512 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 HIST1H2AGP0C0S8 130 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 HIST1H2ADP20671 130 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 HNF4AP41235 474 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 USP39Q53GS9 565 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 SNRNP48Q6IEG0 339 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 SLCO6A1Q86UG4 719 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 LHFPL3Q86UP9 236 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 FAR1Q8WVX9 515 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 HIST1H2AHQ96KK5 128 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 HIST1H2AJQ99878 128 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 H2AFJQ9BTM1 129 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 SP110Q9HB58 689 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 TOPORSQ9NS56 1045 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 PNPLA7Q6ZV29 1317 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 TBX2Q13207 712 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 SLFN13Q68D06 897 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 BHLHE22Q8NFJ8 381 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 RDH11Q8TC12 318 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 NOL11Q9H8H0 719 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 TMEM216Q9P0N5 145 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 CYP2C9P11712 490 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 ACADSBP45954 432 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 SMIM11AP58511 58 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 NFX1Q12986 1120 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 FAM102AQ5T9C2 384 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 C4orf50Q6ZRC1 276 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 FAM160B2Q86V87 743 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 CAMKK2Q96RR4 588 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 THUMPD3Q9BV44 507 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 NR2C2P49116 596 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 TCIRG1Q13488 830 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 STOX1Q6ZVD7 989 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 FRMPD4Q14CM0 1322 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 TMCC2O75069 709 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 ITGA10O75578 1167 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 SHROOM1Q2M3G4 852 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 DNAJC11Q9NVH1 559 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 ZNF224Q9NZL3 707 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 SRP68Q9UHB9 627 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 PTBP2Q9UKA9 531 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 MLNP12872 115 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 EFNA5P52803 228 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 TSTA3Q13630 321 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 SPATS1Q496A3 300 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 GPD1LQ8N335 351 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 ATPAF2Q8N5M1 289 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 SAMD3Q8N6K7 520 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 SPERTQ8NA61 448 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 HELQQ8TDG4 1101 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 CPNE1Q99829 537 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 MED11Q9P086 117 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 RUVBL2Q9Y230 463 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 TSPAN4O14817 238 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 CHP2O43745 196 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 AKR1B1P15121 316 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ABATP80404 500 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 NFIL3Q16649 462 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 HSD17B12Q53GQ0 312 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 TTC23LQ6PF05 361 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 XKR8Q9H6D3 395 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 DHX33Q9H6R0 707 aaKnown RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 WDR41Q9HAD4 459 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 EMSYQ7Z589 1322 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 KLHDC7AQ5VTJ3 777 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PPP1R10Q96QC0 940 aaKnown RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 DNAJC16Q9Y2G8 782 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 K7ERI5 159 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 CYP19A1P11511 503 aaPredicted RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 VCLP18206 1134 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 STX4Q12846 297 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 TBC1D21Q8IYX1 336 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ELMO2Q96JJ3 720 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 GLS2Q9UI32 602 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 MPZL2O60487 215 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PPP2R1BP30154 601 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PTGES3Q15185 160 aaKnown RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 DCAF15Q66K64 600 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 DNAJB7Q7Z6W7 309 aaPredicted RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 SLC44A2Q8IWA5 706 aaPredicted RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 PQLC1Q8N2U9 271 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PCDHGC5Q9Y5F6 944 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 MAGEB3O15480 346 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 UGT2B11O75310 529 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ITGA2BP08514 1039 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 DGKDQ16760 1214 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 DGKKQ5KSL6 1271 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PPM1LQ5SGD2 360 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 CRTC3Q6UUV7 619 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 SZRD1Q7Z422 152 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 CMTR1Q8N1G2 835 aaKnown RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 NEDD4LQ96PU5 975 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ARMC7Q9H6L4 198 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 TMEM8AQ9HCN3 771 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 NAALADL1Q9UQQ1 740 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ANKRD26Q9UPS8 1709 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 TESPA1A2RU30 521 aaPredicted RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 TFE3P19532 575 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms