RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 GPR152Q8TDT2 470 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 ART4Q93070 314 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 SNF8Q96H20 258 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 FAM53CQ9NYF3 392 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 H3BRJ5 948 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 RBP3P10745 1247 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 ATF2P15336 505 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 GOT1P17174 413 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 TUFMP49411 452 aaKnown RBP22.38■■□□□ 1.17
USP6NL-204ENST00000606752 HTRA4P83105 476 aaPredicted RBP22.38■■□□□ 1.17
USP6NL-204ENST00000606752 RNF139Q8WU17 664 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 CEP295NLQ96MC4 621 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 SMOC2Q9H3U7 446 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 ANLNQ9NQW6 1124 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 TMEM51Q9NW97 253 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 AFF4Q9UHB7 1163 aaKnown RBP22.38■■□□□ 1.17
USP6NL-204ENST00000606752 HPCAL4Q9UM19 191 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 SGK1O00141 431 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 TMEM240Q5SV17 173 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 ZNF461Q8TAF7 563 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 FBXO32Q969P5 355 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 TKTL2Q9H0I9 626 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 OSER1Q9NX31 292 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 GMIPQ9P107 970 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 PCDHB12Q9Y5F1 795 aa22.38■■□□□ 1.17
USP6NL-204ENST00000606752 IRAK2O43187 625 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 ABLIM3O94929 683 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 HSPA9P38646 679 aaKnown RBP22.37■■□□□ 1.17
USP6NL-204ENST00000606752 NR2C2P49116 596 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 TPGS2Q68CL5 300 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 VPS52Q8N1B4 723 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 BBOF1Q8ND07 529 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 RSAD2Q8WXG1 361 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 RNF34Q969K3 372 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 LRRC45Q96CN5 670 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 ACBD3Q9H3P7 528 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 HSFX1Q9UBD0 423 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 MTRF1LQ9UGC7 380 aaKnown RBP22.37■■□□□ 1.17
USP6NL-204ENST00000606752 HEY1Q9Y5J3 304 aa22.37■■□□□ 1.17
USP6NL-204ENST00000606752 I6L893 689 aaPredicted RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 CREB3O43889 395 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 URODP06132 367 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 AMPD1P23109 780 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 STIP1P31948 543 aaKnown RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 VPS41P49754 854 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 PSRC1Q6PGN9 363 aaPredicted RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 FIBCD1Q8N539 461 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 GLIS1Q8NBF1 620 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 TSEN2Q8NCE0 465 aaKnown RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 CASP10Q92851 521 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 ZBED2Q9BTP6 218 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 PCDH9Q9HC56 1237 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 CLIC5Q9NZA1 410 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 STK39Q9UEW8 545 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 INSL6Q9Y581 213 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 IFNB1P01574 187 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 HCAR3P49019 387 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 PSEN1P49768 467 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 ZNF135P52742 658 aaPredicted RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 CAV1Q03135 178 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 SEMA3BQ13214 749 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 BRMS1LQ5PSV4 323 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 MSANTD2Q6P1R3 559 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 DARS2Q6PI48 645 aaKnown RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 PRUNE1Q86TP1 453 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 ZC3H18Q86VM9 953 aaKnown RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 GPR65Q8IYL9 337 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 C7orf61Q8IZ16 206 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 C10orf88Q9H8K7 445 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 ARHGEF4Q9NR80 690 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 TLR8Q9NR97 1041 aaKnown RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 OGFRQ9NZT2 677 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 CXXC1Q9P0U4 656 aaPredicted RBP22.36■■□□□ 1.17
USP6NL-204ENST00000606752 SFMBT1Q9UHJ3 866 aa22.36■■□□□ 1.17
USP6NL-204ENST00000606752 SLC38A8A6NNN8 435 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 H7C0C1 242 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 EEF2KO00418 725 aaKnown RBP22.35■■□□□ 1.17
USP6NL-204ENST00000606752 TP73O15350 636 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 ZSCAN5DPP0CG00 497 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 ETS1P14921 441 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 ATF6P18850 670 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 ATP5OP48047 213 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 TAF10Q12962 218 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 MTMR3Q13615 1198 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 NCBP2-AS2Q69YL0 99 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 GIPC2Q8TF65 315 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 ARHGEF38Q9NXL2 777 aa22.35■■□□□ 1.17
USP6NL-204ENST00000606752 CCR1P32246 355 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 ITGA8P53708 1063 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 RAB33AQ14088 237 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 RFX8Q6ZV50 586 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 TMC3Q7Z5M5 1100 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 UNC45BQ8IWX7 931 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 SERPINB11Q96P15 392 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 TTLL2Q9BWV7 592 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 MRPL17Q9NRX2 175 aaKnown RBP22.34■■□□□ 1.17
USP6NL-204ENST00000606752 ANAPC5Q9UJX4 755 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 NUDT5Q9UKK9 219 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 FAM72CH0Y354 149 aa22.34■■□□□ 1.17
USP6NL-204ENST00000606752 FGF18O76093 207 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms