RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 CCDC68Q9H2F9 335 aa4.61□□□□□ -1.67
AC004542.1-201ENST00000602955 TAOK3Q9H2K8 898 aa4.61□□□□□ -1.67
AC004542.1-201ENST00000602955 STN1Q9H668 368 aaKnown RBP4.61□□□□□ -1.67
AC004542.1-201ENST00000602955 SYNPO2LQ9H987 977 aa4.61□□□□□ -1.67
AC004542.1-201ENST00000602955 GLOD4Q9HC38 313 aa4.61□□□□□ -1.67
AC004542.1-201ENST00000602955 TRPC5Q9UL62 973 aaPredicted RBP4.61□□□□□ -1.67
AC004542.1-201ENST00000602955 PCDHA10Q9Y5I2 948 aa4.61□□□□□ -1.67
AC004542.1-201ENST00000602955 NOX1Q9Y5S8 564 aa4.61□□□□□ -1.67
AC004542.1-201ENST00000602955 TRGV11A0A075B6L2 103 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 CCDC187A0A096LP49 1063 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 AGAP5A6NIR3 686 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 H3BNC9 293 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 PSMD9O00233 223 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 RNASET2O00584 256 aaKnown RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 SLC16A3O15427 465 aaKnown RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 PTP4A3O75365 173 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 TULP3O75386 442 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 TIPRLO75663 272 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 SGPL1O95470 568 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 ERBB2P04626 1255 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 PDHA1P08559 390 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 ACP5P13686 325 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 PSMA4P25789 261 aaKnown RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 HOXD13P35453 343 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 PAFAH1B1P43034 410 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 GPD2P43304 727 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 RCAN1P53805 252 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 RPP30P78346 268 aaKnown RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 TLE3Q04726 772 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 RNASELQ05823 741 aaKnown RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 BFSP2Q13515 415 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 CBFBQ13951 182 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 EIF4A2Q14240 407 aaKnown RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 NFIL3Q16649 462 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D10BQ4KMP7 808 aaPredicted RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 SNX30Q5VWJ9 437 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 DIS3L2Q8IYB7 885 aaKnown RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 SYT8Q8NBV8 401 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 CTHRC1Q96CG8 243 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 MASTLQ96GX5 879 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 VPS50Q96JG6 964 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 CENPOQ9BU64 300 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 ARHGAP39Q9C0H5 1083 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 GHITMQ9H3K2 345 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 AKIP1Q9NQ31 210 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 ANKEF1Q9NU02 776 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 PPP1R14DQ9NXH3 145 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D14Q9P2M4 693 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 SLC25A10Q9UBX3 287 aaPredicted RBP4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 NAALADL1Q9UQQ1 740 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 ZNF536O15090 1300 aa4.6□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3DA0A087WVF3 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3IA0A087WXS9 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3EA0A087X179 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3KA0A087X1G2 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3BA6NDS4 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3FA6NER0 549 aaPredicted RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 PATE3B3GLJ2 98 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3LB9A6J9 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TSPAN4O14817 238 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 ANP32CO43423 234 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 SPRY2O43597 315 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 ORC4O43929 436 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 DHX16O60231 1041 aaKnown RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 URI1O94763 535 aaPredicted RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 CLEC3BP05452 202 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3HP0C7X1 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 HSPA1AP0DMV8 641 aaKnown RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 HSPA1BP0DMV9 641 aaKnown RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 LAMP2P13473 410 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 ALADP13716 330 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 PPP3CBP16298 524 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 ALOX12P18054 663 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 ACO1P21399 889 aaKnown RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 RRM1P23921 792 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 ADRA1DP25100 572 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 EPHA8P29322 1005 aaPredicted RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 GKP32189 559 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 MCM5P33992 734 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 GRK5P34947 590 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 HOXD12P35452 270 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 GGT5P36269 586 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 PCP4P48539 62 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 HNRNPMP52272 730 aaKnown RBP eCLIP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TAS2R50P59544 299 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 FAM189BP81408 668 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 ITIH3Q06033 890 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 PTP4A2Q12974 167 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 RESTQ13127 1097 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 FAM187BQ17R55 369 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 CCDC96Q2M329 555 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 BEAN1Q3B7T3 259 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 FAM133BQ5BKY9 247 aaKnown RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 ZNF648Q5T619 568 aaPredicted RBP4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TEDDM1Q5T9Z0 273 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3GQ6DHY5 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 TBC1D3CQ6IPX1 549 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 C16orf89Q6UX73 402 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 MAVSQ7Z434 540 aa4.59□□□□□ -1.67
AC004542.1-201ENST00000602955 KRT77Q7Z794 578 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms