RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 WBP2Q969T9 261 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 BICD1Q96G01 975 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 LOXL4Q96JB6 756 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 EDEM2Q9BV94 578 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 TIPINQ9BVW5 301 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 TRIM9Q9C026 710 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 ECT2Q9H8V3 914 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 TMEM74BQ9NUR3 256 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 TDP1Q9NUW8 608 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 DPP3Q9NY33 737 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 HSFX1Q9UBD0 423 aa8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 MBD1Q9UIS9 605 aaPredicted RBP8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 NOL7Q9UMY1 257 aaKnown RBP8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 MAGED2Q9UNF1 606 aaPredicted RBP8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 GCN1Q92616 2671 aaKnown RBP8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 NYNRINQ9P2P1 1898 aaKnown RBP8.45□□□□□ -1.06
PPP4R1-225ENST00000583438 CKAP5Q14008 2032 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 CCDC163A0A0D9SF12 145 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 LAD1O00515 517 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 CAPNS1P04632 268 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 PROS1P07225 676 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 CCDC192P0DO97 292 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 CDC25CP30307 473 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 POLR2BP30876 1174 aaKnown RBP8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 PGFP49763 221 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 TAF6P49848 677 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 FAM193AP78312 1265 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 IRX4P78413 519 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 COL9A2Q14055 689 aaPredicted RBP8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 PPP2R5DQ14738 602 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 ZBTB37Q5TC79 503 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 PMS2CLQ68D20 193 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 SYT13Q7L8C5 426 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 LIMS2Q7Z4I7 341 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 ARL14EPQ8N8R7 260 aaPredicted RBP8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 RNF214Q8ND24 703 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 MDGA1Q8NFP4 955 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 USP33Q8TEY7 942 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 RLN3Q8WXF3 142 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 RAD54LQ92698 747 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 UTP4Q969X6 686 aaKnown RBP8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 DNAJC19Q96DA6 116 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 SAAL1Q96ER3 474 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 CHAMP1Q96JM3 812 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 MYRFLQ96LU7 910 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 FNBP1Q96RU3 617 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 P2RY13Q9BPV8 354 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 CD93Q9NPY3 652 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 CRTAC1Q9NQ79 661 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 GTF3C4Q9UKN8 822 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 ODF2LQ9ULJ1 636 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 C2CD2Q9Y426 696 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 CORINQ9Y5Q5 1042 aa8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 ATXN2Q99700 1313 aaKnown RBP8.44□□□□□ -1.06
PPP4R1-225ENST00000583438 GOLGA8IPA6NC78 632 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 MYMKA6NI61 221 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 GOLGA8JA6NMD2 632 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 KPNA7A9QM74 516 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 TAF4O00268 1085 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 TRIM24O15164 1050 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 ADAM23O75077 832 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 CYP17A1P05093 508 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 ITGB3P05106 788 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 LMO2P25791 158 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 HOXD13P35453 343 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 PTGER3P43115 390 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 SLC6A11P48066 632 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 TUFMP49411 452 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 NOVA1P51513 510 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 PSMC1P62191 440 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 HMGN5P82970 282 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 CREB5Q02930 508 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 SOWAHAQ2M3V2 549 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 ARHGAP15Q53QZ3 475 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 EMC10Q5UCC4 262 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 RNF43Q68DV7 783 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 IL31Q6EBC2 164 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 KIAA1211LQ6NV74 962 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 ARMCX5Q6P1M9 558 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 UNQ6494/PRO21346Q6UXR6 183 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 UBE3DQ7Z6J8 389 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 ITIH5Q86UX2 942 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 RASSF3Q86WH2 238 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 CCDC33Q8N5R6 958 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 MYCT1Q8N699 235 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 OR5B17Q8NGF7 314 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 OR2I1PQ8NGU4 316 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 OLIG1Q8TAK6 271 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 SPPL2BQ8TCT7 592 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 SH3RF2Q8TEC5 729 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 FBLIM1Q8WUP2 373 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 LEO1Q8WVC0 666 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 HPS3Q969F9 1004 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 EPSTI1Q96J88 318 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 CBWD1Q9BRT8 395 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 RNF38Q9H0F5 515 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 ACSS3Q9H6R3 686 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 PARVGQ9HBI0 331 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 CD248Q9HCU0 757 aa8.43□□□□□ -1.06
PPP4R1-225ENST00000583438 TRPC7Q9HCX4 862 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms