RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SCAMP3O14828 347 aaKnown RBP11.09□□□□□ -0.63
LITAF-216ENST00000574848 CACNG3O60359 315 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 KAT7O95251 611 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 APBB3O95704 486 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 TBX18O95935 607 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 PAEPP09466 180 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 CCDC172P0C7W6 258 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 SETSIPP0DME0 302 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 VDRP11473 427 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 RARGP13631 454 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 GRIA2P42262 883 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 KIR2DL1P43626 348 aaPredicted RBP11.09□□□□□ -0.63
LITAF-216ENST00000574848 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 ID4P47928 161 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 KLK7P49862 253 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 SLC8A3P57103 927 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 GNG11P61952 73 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 GCNT1Q02742 428 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 MESP2Q0VG99 397 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 BST2Q10589 180 aaKnown RBP11.09□□□□□ -0.63
LITAF-216ENST00000574848 SRSF5Q13243 272 aaKnown RBP11.09□□□□□ -0.63
LITAF-216ENST00000574848 GOLGA7BQ2TAP0 167 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 PKDCCQ504Y2 493 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 SGO2Q562F6 1265 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 HEATR6Q6AI08 1181 aaKnown RBP11.09□□□□□ -0.63
LITAF-216ENST00000574848 PM20D1Q6GTS8 502 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 SYT10Q6XYQ8 523 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 ZNF662Q6ZS27 426 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 RRAGAQ7L523 313 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 KIAA1328Q86T90 577 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 RASSF3Q86WH2 238 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 KIAA2013Q8IYS2 634 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 SCML4Q8N228 414 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 ARHGAP18Q8N392 663 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 LOXL4Q96JB6 756 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 NT5C1BQ96P26 610 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 SPAG5Q96R06 1193 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 DESI2Q9BSY9 194 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 NHEJ1Q9H9Q4 299 aaPredicted RBP11.09□□□□□ -0.63
LITAF-216ENST00000574848 PARD6AQ9NPB6 346 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 DLL3Q9NYJ7 618 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 DNAI1Q9UI46 699 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 DNMT3LQ9UJW3 386 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 NAGPAQ9UK23 515 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 LSM7Q9UK45 103 aaKnown RBP11.09□□□□□ -0.63
LITAF-216ENST00000574848 TSPAN16Q9UKR8 245 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 BZW2Q9Y6E2 419 aaKnown RBP11.09□□□□□ -0.63
LITAF-216ENST00000574848 SPAG17Q6Q759 2223 aa11.09□□□□□ -0.63
LITAF-216ENST00000574848 LRRC53A6NM62 1247 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
LITAF-216ENST00000574848 TULP3O75386 442 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 RPP40O75818 363 aaKnown RBP11.08□□□□□ -0.64
LITAF-216ENST00000574848 STC2O76061 302 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 APODP05090 189 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 SERPING1P05155 500 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 IRF1P10914 325 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 RALAP11233 206 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 TNFRSF4P43489 277 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 SLC6A11P48066 632 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 ZNF132P52740 706 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 LMNB2Q03252 620 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 PDE4CQ08493 712 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 KCNMA1Q12791 1236 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 PREPLQ4J6C6 727 aaPredicted RBP11.08□□□□□ -0.64
LITAF-216ENST00000574848 SMYD5Q6GMV2 418 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 WDR59Q6PJI9 974 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 PRR23BQ6ZRT6 265 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 ERMP1Q7Z2K6 904 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 VPS36Q86VN1 386 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 FAM160A2Q8N612 972 aaPredicted RBP11.08□□□□□ -0.64
LITAF-216ENST00000574848 TERB1Q8NA31 727 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 KCTD13Q8WZ19 329 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 RMDN1Q96DB5 314 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 ZC3H10Q96K80 434 aaKnown RBP11.08□□□□□ -0.64
LITAF-216ENST00000574848 HHIPQ96QV1 700 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 ARHGEF4Q9NR80 690 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 POLR3BQ9NW08 1133 aaPredicted RBP11.08□□□□□ -0.64
LITAF-216ENST00000574848 CNTN6Q9UQ52 1028 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 ATG2BQ96BY7 2078 aa11.08□□□□□ -0.64
LITAF-216ENST00000574848 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
LITAF-216ENST00000574848 TULP2O00295 520 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 MDM4O15151 490 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 AXIN1O15169 862 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 AKR1B10O60218 316 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
LITAF-216ENST00000574848 EPN2O95208 641 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 ZBED1O96006 694 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 TKTL1P51854 596 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 DGKEP52429 567 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 POLR2FP61218 127 aaKnown RBP11.07□□□□□ -0.64
LITAF-216ENST00000574848 YWHAGP61981 247 aaKnown RBP eCLIP11.07□□□□□ -0.64
LITAF-216ENST00000574848 FOXK2Q01167 660 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 KIF5AQ12840 1032 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
LITAF-216ENST00000574848 RAPGEF1Q13905 1077 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 STILQ15468 1287 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 ASIC2Q16515 512 aa11.07□□□□□ -0.64
LITAF-216ENST00000574848 CRY1Q16526 586 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms