RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 FSD1LQ9BXM9 530 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 FAM105AQ9NUU6 356 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 TMEM39AQ9NV64 488 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 ZFATQ9P243 1243 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 DNPEPQ9ULA0 475 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 STRIP2Q9ULQ0 834 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 WDR90Q96KV7 1748 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 A0A1W2PQ45 241 aaPredicted RBP7.81□□□□□ -1.16
RPA1-207ENST00000574049 A0A1W2PQY0 241 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 GTPBP10A4D1E9 387 aaKnown RBP7.81□□□□□ -1.16
RPA1-207ENST00000574049 AGPSO00116 658 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 P4HA2O15460 535 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 ZC3H11AO75152 810 aaKnown RBP eCLIP7.81□□□□□ -1.16
RPA1-207ENST00000574049 PMPCBO75439 489 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 HOXA11P31270 313 aaPredicted RBP7.81□□□□□ -1.16
RPA1-207ENST00000574049 NDST1P52848 882 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 RABGGTBP53611 331 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 NRLP54845 237 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 USP4Q13107 963 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 NFIL3Q16649 462 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 DCAF4L1Q3SXM0 396 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 KDM7AQ6ZMT4 941 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 ZCCHC23Q6ZST2 131 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 TRMT10CQ7L0Y3 403 aaKnown RBP7.81□□□□□ -1.16
RPA1-207ENST00000574049 PRR7Q8TB68 274 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 HELQQ8TDG4 1101 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 AGAP11Q8TF27 550 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 RXFP2Q8WXD0 754 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 FAM111AQ96PZ2 611 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 C15orf41Q9Y2V0 281 aa7.81□□□□□ -1.16
RPA1-207ENST00000574049 CNTNAP2Q9UHC6 1331 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 SMIM28A0A1B0GU29 152 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 UBA6A0AVT1 1052 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 H3BRJ5 948 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 MAPK13O15264 365 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 B4GALT4O60513 344 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 SEC24DO94855 1032 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 HSPA4LO95757 839 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 CHRNA1P02708 482 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 THP07101 528 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 FGFR1P11362 822 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 TPH1P17752 444 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 AARSP49588 968 aaKnown RBP eCLIP7.8□□□□□ -1.16
RPA1-207ENST00000574049 TLE2Q04725 743 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 GLB1LQ6UWU2 654 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 ARID3BQ8IVW6 561 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 REM2Q8IYK8 340 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 POU5F2Q8N7G0 328 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 APPL2Q8NEU8 664 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 AENQ8WTP8 325 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 CELF6Q96J87 481 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 ZMAT2Q96NC0 199 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 TRIM55Q9BYV6 548 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 ADAMTS10Q9H324 1103 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 PABPC3Q9H361 631 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 ABI2Q9NYB9 513 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 GTSE1Q9NYZ3 720 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 USP15Q9Y4E8 981 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 OTOFQ9HC10 1997 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 COL1A2P08123 1366 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 IQANK1A0A1B0GTG1 560 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 M0QYT0 321 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 MAP3K7O43318 606 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 ADAMTS4O75173 837 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 GPR32O75388 356 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 EPHB2P29323 1055 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 MAPK8P45983 427 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 GLRBP48167 497 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 ARFIP2P53365 341 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 CDCA2Q69YH5 1023 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 ENOSF1Q7L5Y1 443 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 ARL10Q8N8L6 244 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 PAWRQ96IZ0 340 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 SPATA17Q96L03 361 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 PCDHB18PQ96TA0 734 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 UBQLN1Q9UMX0 589 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 CITO14578 2027 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 CFAP73A6NFT4 308 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 APOL1O14791 398 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 TPST1O60507 370 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 CDH16O75309 829 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 F7P08709 466 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 BRCC3P46736 316 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 CSE1LP55060 971 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 GSCP56915 257 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 OCRLQ01968 901 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 FASTKD1Q53R41 847 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 NPNTQ6UXI9 565 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 UTS2BQ765I0 119 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 TMCO2Q7Z6W1 182 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 IFNEQ86WN2 208 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 MCOLN2Q8IZK6 566 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 NDUFAF2Q8N183 169 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 GBP7Q8N8V2 638 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 NDRG1Q92597 394 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 SYN2Q92777 582 aaPredicted RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 NAF1Q96HR8 494 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 FBXL18Q96ME1 805 aa7.8□□□□□ -1.16
RPA1-207ENST00000574049 DDX50Q9BQ39 737 aaKnown RBP7.8□□□□□ -1.16
RPA1-207ENST00000574049 ZBED2Q9BTP6 218 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms