RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 MED7O43513 233 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 GREM1O60565 184 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 STC2O76061 302 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 KAT7O95251 611 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 HMBSP08397 361 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 SLC9A1P19634 815 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 EEF1GP26641 437 aaKnown RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 HOXA6P31267 233 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 CNR2P34972 360 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 USP8P40818 1118 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 GRIA2P42262 883 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 PXNP49023 591 aaPredicted RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 ZNF132P52740 706 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 KDSRQ06136 332 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 TBX2Q13207 712 aaPredicted RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 DMC1Q14565 340 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 MAN2A1Q16706 1144 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 ARHGAP44Q17R89 818 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 FILIP1LQ4L180 1135 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 PKDCCQ504Y2 493 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 C2orf27AQ580R0 203 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 HSP90AA4PQ58FG1 418 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 SWT1Q5T5J6 900 aaKnown RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 PMF1Q6P1K2 205 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 GJB7Q6PEY0 223 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 Q6ZNB5 142 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 PRR23BQ6ZRT6 265 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 TPGS1Q6ZTW0 290 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 SYT13Q7L8C5 426 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 WDR5BQ86VZ2 330 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 SUMF1Q8NBK3 374 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 SPC24Q8NBT2 197 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 ANKRD20A12PQ8NF67 263 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 RNF139Q8WU17 664 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 SLC35F5Q8WV83 523 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 RUBCNQ92622 972 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 SECISBP2LQ93073 1101 aaKnown RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 NAP1L5Q96NT1 182 aaPredicted RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 ZSWIM1Q9BR11 485 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 TUBGCP2Q9BSJ2 902 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 BBS2Q9BXC9 721 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 DCLK3Q9C098 648 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 KCNF1Q9H3M0 494 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 CNGB3Q9NQW8 809 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 SAMSN1Q9NSI8 373 aaKnown RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 OLA1Q9NTK5 396 aaKnown RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 POLR3BQ9NW08 1133 aaPredicted RBP9.5□□□□□ -0.89
NDE1-207ENST00000573203 WDR35Q9P2L0 1181 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 DEC1Q9P2X7 70 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 APEX2Q9UBZ4 518 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 CNTN6Q9UQ52 1028 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 ZNF510Q9Y2H8 683 aa9.5□□□□□ -0.89
NDE1-207ENST00000573203 ZNF292O60281 2723 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 TBC1D3BA6NDS4 549 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 YJEFN3A6XGL0 299 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 E7ENQ6 273 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 THAP12O43422 761 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 NRDCO43847 1150 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 TULP3O75386 442 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 FBXO21O94952 628 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 TYRP14679 529 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 PON1P27169 355 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 GNA15P30679 374 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 CORO1AP31146 461 aaKnown RBP9.49□□□□□ -0.89
NDE1-207ENST00000573203 HOXC13P31276 330 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 PBX1P40424 430 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 TNFRSF4P43489 277 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 TERF1P54274 439 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 DAOAP59103 153 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 MRPS21P82921 87 aaKnown RBP9.49□□□□□ -0.89
NDE1-207ENST00000573203 MESP2Q0VG99 397 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 SRSF5Q13243 272 aaKnown RBP9.49□□□□□ -0.89
NDE1-207ENST00000573203 SIM2Q14190 667 aaPredicted RBP9.49□□□□□ -0.89
NDE1-207ENST00000573203 LPAL2Q16609 132 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 VWA3BQ502W6 1294 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 BSPRYQ5W0U4 402 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 SPECC1LQ69YQ0 1117 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 GRAMD4Q6IC98 578 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 CEP68Q76N32 757 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 BHLHA9Q7RTU4 235 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 FMNL3Q8IVF7 1028 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 SFTPA1Q8IWL2 248 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 ETFBKMTQ8IXQ9 262 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 SCML4Q8N228 414 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 DCLK2Q8N568 766 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 CAMKK1Q8N5S9 505 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 CCDC112Q8NEF3 446 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 USP33Q8TEY7 942 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 EDEM1Q92611 657 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 GOLGA1Q92805 767 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 HSFY1Q96LI6 401 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 XPO6Q96QU8 1125 aaKnown RBP9.49□□□□□ -0.89
NDE1-207ENST00000573203 HHIPQ96QV1 700 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 NDST4Q9H3R1 872 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 ST7Q9NRC1 585 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 ABCC13Q9NSE7 274 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 DNAJC17Q9NVM6 304 aaKnown RBP9.49□□□□□ -0.89
NDE1-207ENST00000573203 GMEB2Q9UKD1 530 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 EML5Q05BV3 1969 aa9.49□□□□□ -0.89
NDE1-207ENST00000573203 ITIH6Q6UXX5 1313 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms